| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5394 |
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| Symbol | |
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| ID | 4016353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 151906 |
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| End bp | 153291 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637945014 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_552146 |
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| Protein GI | 91791196 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.172533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGG CAAAGCGTCA GATGCCGGAC CAATCCGGGC GGGTGAGCGT AGCGCACGGT
GAAGCTGTGC GCGATCTCAT CAGCGACGAA GCCTGCGACC CGCTCTCTGA ACACCCGGAC
ATAGGGTCGG TAAAGTCAAA GGCAGGCACA GGTGGCCTGC TGGAAGCGGC GCTGACAAGA
GAGAACCTGC AAGTGGCATG GAAGCGGGTC AAGGCCAACA AGGGTGCTGC CGGGGTGGAC
GGGCTCGACA TCGAGCACAC TGCTCAGACA ATACGCAACC ATTGGTCCCA AATCCGCCAA
GAGCTGCTGG CAGGAACGTA CCGGCCAAGC CCGGTGCGAC GGGTGATGAT TCCCAAACCC
GATGGAAGCC AGCGTGAGCT GGGCATTCCG ACGGTGCTGG ATCGGTTGAT CCAGCAGGCA
CTGCTGCAAG TGCTGCAACC CCTGATCGAT CCTACATTTA GCGAGCACAG CCACGGGTTT
CGTCCTGGGC GGCGTGCGCA CGACGCGGTG AAGGCCGCGC GGGCGCACGT GCAATCGGGC
AAACGTGTAG TGGTTGACGT GGACCTGTCG AAGTTCTTCG ACCGGGTCAA TCACGACATC
CTGATCGACA GACTCAGAAA GCGTGTCGAT GATGCCGGAG TCATCCGGCT GATTCGGGCG
TACCTGAACG CTGGGATCAT GGATGGAGGG GTGGTGATGG ATCGTCAACA GGGCACGCCG
CAGGGTGGGC CCCTGTCACC GCTGTTGGCC AACGTGCTGC TGGACGAAGT GGACAAGGTG
TTGGAGGCGC GGGGCTATAG CTTTGCGCGC TACGCTGATG ACTGCAACGT CTATGTGGGC
AGTGTGAAGG CGGGGCAGCG GGTGATGGAG CTGCTCAGGA AGTTGTACGC CGGGCTGAAG
CTTCAAATCA ACGAAGCCAA GAGTGCGGTG GCAAGCGCCT TCGGGCGCAA GTTTCTGGGC
TACGCGCTGT GGGTGGCTAA GGGCAAAGAG GTCAAATGCA AAGTGGCTGA GAAGCCGCTG
CGCGACTTCA AGGCCCGAAT CCGACAACTC ACGAGCCGCT CGGGCGGGCG CAGCATGGAG
CAAGTGGTGG AAAAGCTCAG GCCCTATGTG CTGGGCTGGA AAGCGTATTT CGGACTGGCG
CAAACACCAA GAGTCTGGCG TGAGCTGGAC AAATGGTTAC GTCACCGACT AAGGGCGATT
CAGCTTAAAC ATTGGAAGCG GCCGGGGACG ATTTACCGAG AGCTCAGAGC ACTTGGTGCA
GACGAAGATG TTGCAAAACG GGTGGCGGTG TACAGTCGCC GCTGGTGGCG CAACAGCGCT
ATGCTGCTGA ACAATGTGTT GACAATCGCT TACTTCGATC GAATGGGCGT ACCCCGACTC
TCATGA
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| Protein sequence | MLKAKRQMPD QSGRVSVAHG EAVRDLISDE ACDPLSEHPD IGSVKSKAGT GGLLEAALTR
ENLQVAWKRV KANKGAAGVD GLDIEHTAQT IRNHWSQIRQ ELLAGTYRPS PVRRVMIPKP
DGSQRELGIP TVLDRLIQQA LLQVLQPLID PTFSEHSHGF RPGRRAHDAV KAARAHVQSG
KRVVVDVDLS KFFDRVNHDI LIDRLRKRVD DAGVIRLIRA YLNAGIMDGG VVMDRQQGTP
QGGPLSPLLA NVLLDEVDKV LEARGYSFAR YADDCNVYVG SVKAGQRVME LLRKLYAGLK
LQINEAKSAV ASAFGRKFLG YALWVAKGKE VKCKVAEKPL RDFKARIRQL TSRSGGRSME
QVVEKLRPYV LGWKAYFGLA QTPRVWRELD KWLRHRLRAI QLKHWKRPGT IYRELRALGA
DEDVAKRVAV YSRRWWRNSA MLLNNVLTIA YFDRMGVPRL S
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