Gene Bpro_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5300 
Symbol 
ID4016259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp52948 
End bp54165 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID637944925 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_552057 
Protein GI91791107 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.700075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAA CTGTGATTAT TGCCGGCGCC GGTCAGGCGG CCGGCCAGGC GGTTGCGAGC 
CTGCGGCAAG AGGGATTCGA CGGGCGCATC GTGCTGGTCG GCGCCGAGCC GGTGTTGCCG
TATCAGCGCC CGCCGCTGTC GAAGGCATTT TTGGCGGGCA CCTTGCCGCT GGAGCGATTG
TTCCTGAAGC CGCCGGCATT CTACGAGCAG GCGCGTGTGG ACACGCTGCT CGGGGTGGCC
GTCACCGAAC TTGATGCCGC CCGGCGGCAG GTGAGGCTGG ACGATGGCCG CGAACTGGCG
TTTGATCATC TGCTGCTGGC GACTGGCGGG CGTGCCCGTC GGCTTGACTG CCCGGGTGCC
GACCATCCGC GCCTGCACTA TCTGCGCACC GTGGCTGATG TTGACGGCAT TCGTGCCGCT
CTGCGTCCCG GGGCCCGGCT GGTGCTGATC GGCGGCGGCT ACGTCGGACT CGAGATCGCC
GCCGTGGCCG CCAAACTGGG GCTCGCGGTG ACCGTGCTGG AAGCGGCGCC GACGGTGCTG
GCGCGTGTCA CTTGTCCGGC CGTGGCGCGC TTCTTCGAAA GCGTGCACCG GCAGGCGGGC
GTGACGATCC GCTGCGCGAC GACGGTCTCC GGCATCGAGG GCGATGCTTC GCTGGCGCGG
GTCGTGACCG GCGATGGCGA ACGCATTGAC GCCGACCTGG TCATTGCCGG CATCGGTCTG
CTGCCGAACG TCGAGTTGGC GCAGGCCGCG GGTCTGGTCT GCGACAACGG CATCGTCGTC
GACGAGGAAT GCCGGACCTC TGTGCCCGGC ATTTTCGCGG CTGGCGACTG CACGCAGCAT
CCGAACGCGA TCTACGACAG TCGGCTGCGT CTCGAATCGG TGCACAACGC CATTGAGCAG
GGCAAGACGG CGGCGGCGGC CATGTGTGGC AAGGCCAGGC CGTATCGGCA GGTGCCGTGG
TTCTGGTCCG ATCAGTACGA CCTCAAGTTA CAAACCGCGG GACTCAACCG CGGCTATGAC
CAGGTCGTGA TGCGGGGCAG TACCGACAAC CGTTCGTTTG CGGCGTTCTA CCTGCGCGAC
GGGCGATTGC TTGCCGTCGA TGCGGTCAAC CGCCCGGTCG AGTTCATGGT GGCCAAAGCG
CTGATTGCGA ACCGCACCGT CATCGCGCCC GAGCGGCTCG CCGACGAGCG TATCGCAGCG
AAGGACCTGG CCGGCTGA
 
Protein sequence
MSETVIIAGA GQAAGQAVAS LRQEGFDGRI VLVGAEPVLP YQRPPLSKAF LAGTLPLERL 
FLKPPAFYEQ ARVDTLLGVA VTELDAARRQ VRLDDGRELA FDHLLLATGG RARRLDCPGA
DHPRLHYLRT VADVDGIRAA LRPGARLVLI GGGYVGLEIA AVAAKLGLAV TVLEAAPTVL
ARVTCPAVAR FFESVHRQAG VTIRCATTVS GIEGDASLAR VVTGDGERID ADLVIAGIGL
LPNVELAQAA GLVCDNGIVV DEECRTSVPG IFAAGDCTQH PNAIYDSRLR LESVHNAIEQ
GKTAAAAMCG KARPYRQVPW FWSDQYDLKL QTAGLNRGYD QVVMRGSTDN RSFAAFYLRD
GRLLAVDAVN RPVEFMVAKA LIANRTVIAP ERLADERIAA KDLAG