Gene Bpro_5254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5254 
Symbol 
ID4016233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp2467 
End bp2868 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content63% 
IMG OID637944879 
Producthypothetical protein 
Protein accessionYP_552011 
Protein GI91791061 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACA AACCCCTGCC CGTCATTGAT GGCGAAAGCC GCCCCTATTG GGACGCCCTG 
AAACAGCACC GCTTGACACT CAAGCGCTGC CAAGACTGCG GCAAGCACCA TTTCTATCCG
CGCGCCCTGT GTCCGCACTG CCACTCGGAC GCTGTCGAAT GGGTCGATGC CTGCGGCACC
GGCACCATCT ACAGCTACAC CATCGCGCGC CGGCCGGCCG GTCCGGCCTT CAAGGCCGAC
ACGCCTTACG TTGTGGCGGT GATCGACCTG GATGAGGGCG CGCGCATGAT GACCAACATC
GTCACCGACG ATGTGGAGGC GGTGCGCATC GGCCAGCGCG TGACGGTGCA GTACGACGAC
GTGACCGAAG AGGTCACGCT GCCGAAGTTC CGGCTCTTGT AA
 
Protein sequence
MYDKPLPVID GESRPYWDAL KQHRLTLKRC QDCGKHHFYP RALCPHCHSD AVEWVDACGT 
GTIYSYTIAR RPAGPAFKAD TPYVVAVIDL DEGARMMTNI VTDDVEAVRI GQRVTVQYDD
VTEEVTLPKF RLL