| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5029 |
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| Symbol | |
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| ID | 4015942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 131108 |
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| End bp | 135970 |
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| Gene Length | 4863 bp |
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| Protein Length | 1620 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637944667 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_551799 |
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| Protein GI | 91790848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA CTTACCTGTG CGCTGAAGGT GTTTTGGATG TTGAGCAGGG GGCCTTCAGA
GAGATTGAAA AAGGGTTGCC TGCAAATTGG TTCGGTTTTG CTGGATTCCA GCTATTGCAG
CGTGGCTCCA CTGACCCCCG TGATTTGGAC CTCGTAATAT TTACAACCAA CAGAATTTTT
CTAGTTGAGC TGAAGAATTG GCGAGACGAA ATTGAGTACT CCAATCGGCA GTGGATGCAC
AAAGGAAATT TCGTCAAATC GCCGGTCGAC AAGACTAGAC AAACGGCAAA GGTGTTAGAG
CAGTGTCTAA AAGCAAAACT CTCTAATACC TACATCCCGT TCATTGAGTC GCTGGTTGTG
CTCTGTCATC CCACATGTCG CCTCAAAAAC TTCCCTGACG AAGAGCGGCG TTTTGTTATG
AGTCTTCCTG ATTTTGTAAA GAACCTTGGG AGGGCTGACG AGTACCGCAA GAAGTTTCCT
GAGAAACCTC TTACTTGGCA ATATCCTTCA GCCAATCCAA TTCCAGACAG AAATAAATAT
GAGCGATTTT TTTCGCTGAG CAACCCCCAA ATCCTCGAGC GAAGGACTGA GTACCAAGGA
TTTTTGCAGG TTAGCAGCCT TGCCGACTAC GTTCACCCCA GAATCATTTG GTCTGAGTTT
CGGGCGGAAC ATGGTGAAAA TCGCCGGTCC AAGGCTCTTA TTAGGAAGTG GAACTTTTCC
AACTTAGCGG GGGGCAACTC CACTGCCGCG GAACGAGCTT CCATTGGACT TCGGGAACTT
CGACTGAATG AGATGCTTCG GACGGAGCTT CCAGAGTTGC ATGTTGATTT GCTCGAACCG
GTAGGGTCAG CCTCGCCGGA AGATGTGACA ACTAATTTCG TGGAAGCTTA TCGATTACCT
GCACAGGTCG AACGCCTTGC TGAACTCATC GCCAGGAAGT CTGACATGGA TGATGACGAG
AGACGTTCAT TGGTAAAGAG CGTGCTTGCA AGATTCGCAA AACTTCACTC AGTAGGGATT
GCTCACAGGG ACATTACAAC AAAAACTCTT TGGGTTGTTG AACCCTCGCG AATCATCTTG
TCAAGTTTTG CTGCGGCCAG AATTCCAGAA GGACGCACCG TGGGCGTTAA TCGGGTGGAA
CTGGAGAGTG GGTCAATTCG CCTTCCCGAG GACGATGCCA ATGAGGGCAA GACGGCCGCG
CATTCAGCCT TTGCCCGCGA CGTCTTTCTG CTCGGCGTTC TGTCGTTTGA AATCCTTGAA
GGGACCAGGC TGGAGAACTT GGATAATGTG CCCTTGTATG AGGAGAAAAA TGCCCTCAAG
TCCCCGATGC TGAATGACTG GTTTCAGACA AGCATCAATT GGGACCCGGA GAAGCGCTAT
CAATCTGCCT CTGAAGCACT TGATGCGTTG AACACTGCGC TTGCAACAGA CGTTGAAGCC
AGTGTTGCGG ACGTAGACAT CAGTGTTTAC AAGACTGATG CAAGTCCGAT GACATTGCTC
CCGAAGGAAA TCCTTTCCTC ATTACCTGAT AAAAATGTCT ACATCTCGGA AAAGAACGGC
CAAAAGGTAT TAGTGAAGTG CTGGCCCAAC TTGAGATTTG ACGTAAAACA TCCAAGTCGG
AATCGCAAAC TTCTAGAATT TCTCCAGACA GCTCGCTCGC TCAGGCAATC AGCCTTTAAC
GCCGCCCCTG AAGTTGTCGA CTTTGGAGTT AGTCCTTTTG GACTGATATT GGTTACCAAA
TGGGCGCCGG GTGAAGGGTT CAATGAGTGG TTCGAGCGAT GCTCCTCACA CAAGGAACGC
GCCGAAGTGG CGCTGTCGTT GCTGAATTCG GTTCGCCGCC TTCACGCACT AGGAATCACG
CATGGCGATA TCAAGGGGGC AAACATTGCA GTGTCGCTTT CGGAAGATGG GGAAGTTCAC
GTTGTACTTC TGGATGTCCT TGACCTTACG GCTGACGGTG ATAGCTGCGT AACTGTTGAT
GACCTGCCTC CTCATCTGGA AGGCGGCTCG GCTCTACAGA GGGACCTATA CCTTACGGTG
TCGCTGACAC TTAAGCTTCT ATCTGATGTG GATTTCCCTG CGACGTTTTC TGAGGCCAGT
CGGGCAAAGG AACTCACGGA AGTCAACATT CCCATTGACC TTCTGGCGGA AACTTTGCAG
AAGGAGCTGC ACCCACCAAA AAACATTCAC CCGGCCTTTG TAATCAGCGT TTGGCGAACC
AAGTCCGAAC AGGGGCGATT TCATGAACTG GAAGGTGATA ACGGAAGCTT TCCCGTTGGT
GTTCAGCCAG TGCCAGCGGA AAGGCGAGTT ATCTTCTTTG TGACCGGCTT GCGAGAACAG
GTCATCATTA AATACGACCT ACAGGATGAG CGTGTAATTG AAATTTCTCT GAAGGAAATT
GGACACGACC TCTACGTGTC CAACGCTCGG CGCTCGGCAT TTCGGCTGCA TGCCCAAATT
GGGATTGATT TCGCTGCAGT GTCCGACGCG TCTGAGCTAG TTGAACTGCT TTACTCGAGA
TACCGGTCTA CAAGAGATGA CAATGACTTA GAAGAAAGCC TCCCTGCGGG GGTAGAGGCT
AAAAGCCCAT ATGACGTCCT GGAGGCGCAT GATGCAGGCG AAACTCGGAT TTCGGCGAAG
GCGCTTTGGC AGGCATTGGC AGAGTCGGAT GAGCTGAATG CCACAAGAAT TACTGTTCGG
GCGGGTGTTC AAAAAGTACC CCATGAGAAG TATTCATGGC TGGTCCCATA CGAACTTGAA
GAAGGGGTCC TCGATTTTTC AGAAGGTGAA AAGATTGAGC TACATGAACG CGGAACCGAC
CCGATGAAAG GGACGGAAGC TTGGTTCCGT GTTGGACTGA TTTCTCCGGA TATCGGTAAG
GATGTTTTGC GCGTATTGCC GACCAGCAAT CGCCTCAAGA TTACCGAGGG CAAAACGTTC
TTTGTGAGAG GTTCGTTTGA GACCAGCGCT TCGGAGCGAA GGGTGGCCGC CATGAGACGT
GTCTTGGGTG GTGGCGCTTC AATTCCGAAG ATACAAGAAT ACTTTGACCC ACATCTATCG
GTTCAGCCAT ACCAGTTTCC AATGGCTGCA TTGAATTTAA TTGACAGCCT TGGTTTGAAC
GACCAGCAAA GGGACGCACT GCTTCAGAGT TTCAAGAATG GGCCGATTTC TCTGCTGCAG
GGGCCTCCTG GAACAGGAAA GACAAAATTC ATTTCGTCGT TCGTGCACTT GGCATTAAGC
AGAGGACTTG CAAAGAACAT CTTGCTTGTG AGTCAGTCTC ACGAGGCTGT GAACAATGCA
CTTGAAAAGG TATCTGACCT AGCGGCATCG AACGAAGTTG GCCTGTCGAT GGTGCGCGTT
GGCTCGGCAA CCATGGTTTC GAAAAAGCTG CGGTCAGTGC ACGAGGATGC AAGGCGGCAA
ATCTACCGTG AGAAATTTGA CGCCGAGATT CGAGAGCGAA TAAGGACAGT TGGCTACCAA
CTTGGCTTGC CTAGTGCGTA TGTGAACGAT GCAAGTGATG TATTCATGAC CTTGGGGCAG
TTGCTCAGTC GCATTGAGTT TTTGCAACAG GCCGATAACC CAAACAGAGA CGCCGATGAA
GGTATGCGGA GCGCTCAGAT TAGAAGGCTC AAAGAGCGAT TTTGCGAGAT AGCCAGTTCA
CGGTTTGACC TTGAGGTGAG CACGGAGTCC AACCTGCGTG ATGCCATGGA AGGATTTTTG
AGCAAGGTAG CGGCCACAAA CGGCTCGCCA AGTCCCGAAA AGTGCCAAAA GCTCGAACGC
CTCTTTTGGC TTTCAAAAGA GTTCTCAGAT GTGCTGCGTA GCCCTCATTC GAATTTCACG
TCGTTCTTGT CTCGGACTGC ACGAGTCGTT GCAGGAACGT GCGTAGGGGT TGGGAAGCAC
ATGCTGGGAA TTGTCGACCA TGTGTACGAC TGGGTCATTG TTGACGAGGC TGCCAGGGCG
TCCCCAATGG AACTTGTGGT GGCCATGCAG GCAGGTAGGC GCGTGCTTTT AGTTGGTGAC
CATCTGCAAC TACCTCCGAT GTACCCGAAG GCTGTGGAAG AGAAAACTTC ACAACTTTTG
GGAATTGGTA GGGCTGACTT CAGAAAGATC AACAACTTTC AAAGGGCGTT TTCTTCCGAA
TATGGACGGT CAGTTGGGCG GACGCTTTTG AAGCAGTATC GAATGGCAAG TTCGATAAAT
AGAGTGGTCT CAAACTGCTT CTATGAGGGC GCTCTGACGG TTGATAGGGA GGCTCCAATC
GCAGCATATG AGAAGCTTCC AGAGTATCTG GCCAAGGAGG TTGTCTGGAT TGACACCGCC
GACCAGGGTC GAGCTAGTTT CCACAAGGAG CTTCCAGGGG GCTACGGTGC GCTGGTAAAC
GAAGTTGAAG CAAATATCGT CGTCTCGGTT GTGCGCGAAA TCGCAATGTC TAAAGAATTC
GTTGAAGCGA TTCGAATCAA GGTACATCAG TCTGACTCTG CGCCAATCGG AATCATCACG
ATGTACGCAG CCCAAAGGGA TTTGATACGA CGTAAGTTGG ACCAAGCGGA CTGGGCGGGA
GATATTAGGG ACCTATTTAC TGTTGGCACG GTTGATAGCT ATCAGGGAAA AGAGAACTGC
ATCATCATTT TGTCAGTTGT CAGAAATGAC ACCTCAAGCG TGGTCGGATT CTTGTCTGAG
CCGGAGCGCA TCAACGTTGC ACTGTCCCGA GCCCAGGACC GATTGATTGT GGTCGGCTCA
ACGACGATGT GGTCTGGACG TGCGGGAACT CCTCTGAAGA AGGTTTTGGA TGAAGTGATG
TTAATGTCTA AGGATGGCCA AGCTCAACTG GTCCAATCCC GTGCTTTGAA AGGAGGGGTT
TGA
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| Protein sequence | MKITYLCAEG VLDVEQGAFR EIEKGLPANW FGFAGFQLLQ RGSTDPRDLD LVIFTTNRIF
LVELKNWRDE IEYSNRQWMH KGNFVKSPVD KTRQTAKVLE QCLKAKLSNT YIPFIESLVV
LCHPTCRLKN FPDEERRFVM SLPDFVKNLG RADEYRKKFP EKPLTWQYPS ANPIPDRNKY
ERFFSLSNPQ ILERRTEYQG FLQVSSLADY VHPRIIWSEF RAEHGENRRS KALIRKWNFS
NLAGGNSTAA ERASIGLREL RLNEMLRTEL PELHVDLLEP VGSASPEDVT TNFVEAYRLP
AQVERLAELI ARKSDMDDDE RRSLVKSVLA RFAKLHSVGI AHRDITTKTL WVVEPSRIIL
SSFAAARIPE GRTVGVNRVE LESGSIRLPE DDANEGKTAA HSAFARDVFL LGVLSFEILE
GTRLENLDNV PLYEEKNALK SPMLNDWFQT SINWDPEKRY QSASEALDAL NTALATDVEA
SVADVDISVY KTDASPMTLL PKEILSSLPD KNVYISEKNG QKVLVKCWPN LRFDVKHPSR
NRKLLEFLQT ARSLRQSAFN AAPEVVDFGV SPFGLILVTK WAPGEGFNEW FERCSSHKER
AEVALSLLNS VRRLHALGIT HGDIKGANIA VSLSEDGEVH VVLLDVLDLT ADGDSCVTVD
DLPPHLEGGS ALQRDLYLTV SLTLKLLSDV DFPATFSEAS RAKELTEVNI PIDLLAETLQ
KELHPPKNIH PAFVISVWRT KSEQGRFHEL EGDNGSFPVG VQPVPAERRV IFFVTGLREQ
VIIKYDLQDE RVIEISLKEI GHDLYVSNAR RSAFRLHAQI GIDFAAVSDA SELVELLYSR
YRSTRDDNDL EESLPAGVEA KSPYDVLEAH DAGETRISAK ALWQALAESD ELNATRITVR
AGVQKVPHEK YSWLVPYELE EGVLDFSEGE KIELHERGTD PMKGTEAWFR VGLISPDIGK
DVLRVLPTSN RLKITEGKTF FVRGSFETSA SERRVAAMRR VLGGGASIPK IQEYFDPHLS
VQPYQFPMAA LNLIDSLGLN DQQRDALLQS FKNGPISLLQ GPPGTGKTKF ISSFVHLALS
RGLAKNILLV SQSHEAVNNA LEKVSDLAAS NEVGLSMVRV GSATMVSKKL RSVHEDARRQ
IYREKFDAEI RERIRTVGYQ LGLPSAYVND ASDVFMTLGQ LLSRIEFLQQ ADNPNRDADE
GMRSAQIRRL KERFCEIASS RFDLEVSTES NLRDAMEGFL SKVAATNGSP SPEKCQKLER
LFWLSKEFSD VLRSPHSNFT SFLSRTARVV AGTCVGVGKH MLGIVDHVYD WVIVDEAARA
SPMELVVAMQ AGRRVLLVGD HLQLPPMYPK AVEEKTSQLL GIGRADFRKI NNFQRAFSSE
YGRSVGRTLL KQYRMASSIN RVVSNCFYEG ALTVDREAPI AAYEKLPEYL AKEVVWIDTA
DQGRASFHKE LPGGYGALVN EVEANIVVSV VREIAMSKEF VEAIRIKVHQ SDSAPIGIIT
MYAAQRDLIR RKLDQADWAG DIRDLFTVGT VDSYQGKENC IIILSVVRND TSSVVGFLSE
PERINVALSR AQDRLIVVGS TTMWSGRAGT PLKKVLDEVM LMSKDGQAQL VQSRALKGGV
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