Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5029 |
Symbol | |
ID | 4015942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 131108 |
End bp | 135970 |
Gene Length | 4863 bp |
Protein Length | 1620 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637944667 |
Product | superfamily I DNA/RNA helicase |
Protein accession | YP_551799 |
Protein GI | 91790848 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA CTTACCTGTG CGCTGAAGGT GTTTTGGATG TTGAGCAGGG GGCCTTCAGA GAGATTGAAA AAGGGTTGCC TGCAAATTGG TTCGGTTTTG CTGGATTCCA GCTATTGCAG CGTGGCTCCA CTGACCCCCG TGATTTGGAC CTCGTAATAT TTACAACCAA CAGAATTTTT CTAGTTGAGC TGAAGAATTG GCGAGACGAA ATTGAGTACT CCAATCGGCA GTGGATGCAC AAAGGAAATT TCGTCAAATC GCCGGTCGAC AAGACTAGAC AAACGGCAAA GGTGTTAGAG CAGTGTCTAA AAGCAAAACT CTCTAATACC TACATCCCGT TCATTGAGTC GCTGGTTGTG CTCTGTCATC CCACATGTCG CCTCAAAAAC TTCCCTGACG AAGAGCGGCG TTTTGTTATG AGTCTTCCTG ATTTTGTAAA GAACCTTGGG AGGGCTGACG AGTACCGCAA GAAGTTTCCT GAGAAACCTC TTACTTGGCA ATATCCTTCA GCCAATCCAA TTCCAGACAG AAATAAATAT GAGCGATTTT TTTCGCTGAG CAACCCCCAA ATCCTCGAGC GAAGGACTGA GTACCAAGGA TTTTTGCAGG TTAGCAGCCT TGCCGACTAC GTTCACCCCA GAATCATTTG GTCTGAGTTT CGGGCGGAAC ATGGTGAAAA TCGCCGGTCC AAGGCTCTTA TTAGGAAGTG GAACTTTTCC AACTTAGCGG GGGGCAACTC CACTGCCGCG GAACGAGCTT CCATTGGACT TCGGGAACTT CGACTGAATG AGATGCTTCG GACGGAGCTT CCAGAGTTGC ATGTTGATTT GCTCGAACCG GTAGGGTCAG CCTCGCCGGA AGATGTGACA ACTAATTTCG TGGAAGCTTA TCGATTACCT GCACAGGTCG AACGCCTTGC TGAACTCATC GCCAGGAAGT CTGACATGGA TGATGACGAG AGACGTTCAT TGGTAAAGAG CGTGCTTGCA AGATTCGCAA AACTTCACTC AGTAGGGATT GCTCACAGGG ACATTACAAC AAAAACTCTT TGGGTTGTTG AACCCTCGCG AATCATCTTG TCAAGTTTTG CTGCGGCCAG AATTCCAGAA GGACGCACCG TGGGCGTTAA TCGGGTGGAA CTGGAGAGTG GGTCAATTCG CCTTCCCGAG GACGATGCCA ATGAGGGCAA GACGGCCGCG CATTCAGCCT TTGCCCGCGA CGTCTTTCTG CTCGGCGTTC TGTCGTTTGA AATCCTTGAA GGGACCAGGC TGGAGAACTT GGATAATGTG CCCTTGTATG AGGAGAAAAA TGCCCTCAAG TCCCCGATGC TGAATGACTG GTTTCAGACA AGCATCAATT GGGACCCGGA GAAGCGCTAT CAATCTGCCT CTGAAGCACT TGATGCGTTG AACACTGCGC TTGCAACAGA CGTTGAAGCC AGTGTTGCGG ACGTAGACAT CAGTGTTTAC AAGACTGATG CAAGTCCGAT GACATTGCTC CCGAAGGAAA TCCTTTCCTC ATTACCTGAT AAAAATGTCT ACATCTCGGA AAAGAACGGC CAAAAGGTAT TAGTGAAGTG CTGGCCCAAC TTGAGATTTG ACGTAAAACA TCCAAGTCGG AATCGCAAAC TTCTAGAATT TCTCCAGACA GCTCGCTCGC TCAGGCAATC AGCCTTTAAC GCCGCCCCTG AAGTTGTCGA CTTTGGAGTT AGTCCTTTTG GACTGATATT GGTTACCAAA TGGGCGCCGG GTGAAGGGTT CAATGAGTGG TTCGAGCGAT GCTCCTCACA CAAGGAACGC GCCGAAGTGG CGCTGTCGTT GCTGAATTCG GTTCGCCGCC TTCACGCACT AGGAATCACG CATGGCGATA TCAAGGGGGC AAACATTGCA GTGTCGCTTT CGGAAGATGG GGAAGTTCAC GTTGTACTTC TGGATGTCCT TGACCTTACG GCTGACGGTG ATAGCTGCGT AACTGTTGAT GACCTGCCTC CTCATCTGGA AGGCGGCTCG GCTCTACAGA GGGACCTATA CCTTACGGTG TCGCTGACAC TTAAGCTTCT ATCTGATGTG GATTTCCCTG CGACGTTTTC TGAGGCCAGT CGGGCAAAGG AACTCACGGA AGTCAACATT CCCATTGACC TTCTGGCGGA AACTTTGCAG AAGGAGCTGC ACCCACCAAA AAACATTCAC CCGGCCTTTG TAATCAGCGT TTGGCGAACC AAGTCCGAAC AGGGGCGATT TCATGAACTG GAAGGTGATA ACGGAAGCTT TCCCGTTGGT GTTCAGCCAG TGCCAGCGGA AAGGCGAGTT ATCTTCTTTG TGACCGGCTT GCGAGAACAG GTCATCATTA AATACGACCT ACAGGATGAG CGTGTAATTG AAATTTCTCT GAAGGAAATT GGACACGACC TCTACGTGTC CAACGCTCGG CGCTCGGCAT TTCGGCTGCA TGCCCAAATT GGGATTGATT TCGCTGCAGT GTCCGACGCG TCTGAGCTAG TTGAACTGCT TTACTCGAGA TACCGGTCTA CAAGAGATGA CAATGACTTA GAAGAAAGCC TCCCTGCGGG GGTAGAGGCT AAAAGCCCAT ATGACGTCCT GGAGGCGCAT GATGCAGGCG AAACTCGGAT TTCGGCGAAG GCGCTTTGGC AGGCATTGGC AGAGTCGGAT GAGCTGAATG CCACAAGAAT TACTGTTCGG GCGGGTGTTC AAAAAGTACC CCATGAGAAG TATTCATGGC TGGTCCCATA CGAACTTGAA GAAGGGGTCC TCGATTTTTC AGAAGGTGAA AAGATTGAGC TACATGAACG CGGAACCGAC CCGATGAAAG GGACGGAAGC TTGGTTCCGT GTTGGACTGA TTTCTCCGGA TATCGGTAAG GATGTTTTGC GCGTATTGCC GACCAGCAAT CGCCTCAAGA TTACCGAGGG CAAAACGTTC TTTGTGAGAG GTTCGTTTGA GACCAGCGCT TCGGAGCGAA GGGTGGCCGC CATGAGACGT GTCTTGGGTG GTGGCGCTTC AATTCCGAAG ATACAAGAAT ACTTTGACCC ACATCTATCG GTTCAGCCAT ACCAGTTTCC AATGGCTGCA TTGAATTTAA TTGACAGCCT TGGTTTGAAC GACCAGCAAA GGGACGCACT GCTTCAGAGT TTCAAGAATG GGCCGATTTC TCTGCTGCAG GGGCCTCCTG GAACAGGAAA GACAAAATTC ATTTCGTCGT TCGTGCACTT GGCATTAAGC AGAGGACTTG CAAAGAACAT CTTGCTTGTG AGTCAGTCTC ACGAGGCTGT GAACAATGCA CTTGAAAAGG TATCTGACCT AGCGGCATCG AACGAAGTTG GCCTGTCGAT GGTGCGCGTT GGCTCGGCAA CCATGGTTTC GAAAAAGCTG CGGTCAGTGC ACGAGGATGC AAGGCGGCAA ATCTACCGTG AGAAATTTGA CGCCGAGATT CGAGAGCGAA TAAGGACAGT TGGCTACCAA CTTGGCTTGC CTAGTGCGTA TGTGAACGAT GCAAGTGATG TATTCATGAC CTTGGGGCAG TTGCTCAGTC GCATTGAGTT TTTGCAACAG GCCGATAACC CAAACAGAGA CGCCGATGAA GGTATGCGGA GCGCTCAGAT TAGAAGGCTC AAAGAGCGAT TTTGCGAGAT AGCCAGTTCA CGGTTTGACC TTGAGGTGAG CACGGAGTCC AACCTGCGTG ATGCCATGGA AGGATTTTTG AGCAAGGTAG CGGCCACAAA CGGCTCGCCA AGTCCCGAAA AGTGCCAAAA GCTCGAACGC CTCTTTTGGC TTTCAAAAGA GTTCTCAGAT GTGCTGCGTA GCCCTCATTC GAATTTCACG TCGTTCTTGT CTCGGACTGC ACGAGTCGTT GCAGGAACGT GCGTAGGGGT TGGGAAGCAC ATGCTGGGAA TTGTCGACCA TGTGTACGAC TGGGTCATTG TTGACGAGGC TGCCAGGGCG TCCCCAATGG AACTTGTGGT GGCCATGCAG GCAGGTAGGC GCGTGCTTTT AGTTGGTGAC CATCTGCAAC TACCTCCGAT GTACCCGAAG GCTGTGGAAG AGAAAACTTC ACAACTTTTG GGAATTGGTA GGGCTGACTT CAGAAAGATC AACAACTTTC AAAGGGCGTT TTCTTCCGAA TATGGACGGT CAGTTGGGCG GACGCTTTTG AAGCAGTATC GAATGGCAAG TTCGATAAAT AGAGTGGTCT CAAACTGCTT CTATGAGGGC GCTCTGACGG TTGATAGGGA GGCTCCAATC GCAGCATATG AGAAGCTTCC AGAGTATCTG GCCAAGGAGG TTGTCTGGAT TGACACCGCC GACCAGGGTC GAGCTAGTTT CCACAAGGAG CTTCCAGGGG GCTACGGTGC GCTGGTAAAC GAAGTTGAAG CAAATATCGT CGTCTCGGTT GTGCGCGAAA TCGCAATGTC TAAAGAATTC GTTGAAGCGA TTCGAATCAA GGTACATCAG TCTGACTCTG CGCCAATCGG AATCATCACG ATGTACGCAG CCCAAAGGGA TTTGATACGA CGTAAGTTGG ACCAAGCGGA CTGGGCGGGA GATATTAGGG ACCTATTTAC TGTTGGCACG GTTGATAGCT ATCAGGGAAA AGAGAACTGC ATCATCATTT TGTCAGTTGT CAGAAATGAC ACCTCAAGCG TGGTCGGATT CTTGTCTGAG CCGGAGCGCA TCAACGTTGC ACTGTCCCGA GCCCAGGACC GATTGATTGT GGTCGGCTCA ACGACGATGT GGTCTGGACG TGCGGGAACT CCTCTGAAGA AGGTTTTGGA TGAAGTGATG TTAATGTCTA AGGATGGCCA AGCTCAACTG GTCCAATCCC GTGCTTTGAA AGGAGGGGTT TGA
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Protein sequence | MKITYLCAEG VLDVEQGAFR EIEKGLPANW FGFAGFQLLQ RGSTDPRDLD LVIFTTNRIF LVELKNWRDE IEYSNRQWMH KGNFVKSPVD KTRQTAKVLE QCLKAKLSNT YIPFIESLVV LCHPTCRLKN FPDEERRFVM SLPDFVKNLG RADEYRKKFP EKPLTWQYPS ANPIPDRNKY ERFFSLSNPQ ILERRTEYQG FLQVSSLADY VHPRIIWSEF RAEHGENRRS KALIRKWNFS NLAGGNSTAA ERASIGLREL RLNEMLRTEL PELHVDLLEP VGSASPEDVT TNFVEAYRLP AQVERLAELI ARKSDMDDDE RRSLVKSVLA RFAKLHSVGI AHRDITTKTL WVVEPSRIIL SSFAAARIPE GRTVGVNRVE LESGSIRLPE DDANEGKTAA HSAFARDVFL LGVLSFEILE GTRLENLDNV PLYEEKNALK SPMLNDWFQT SINWDPEKRY QSASEALDAL NTALATDVEA SVADVDISVY KTDASPMTLL PKEILSSLPD KNVYISEKNG QKVLVKCWPN LRFDVKHPSR NRKLLEFLQT ARSLRQSAFN AAPEVVDFGV SPFGLILVTK WAPGEGFNEW FERCSSHKER AEVALSLLNS VRRLHALGIT HGDIKGANIA VSLSEDGEVH VVLLDVLDLT ADGDSCVTVD DLPPHLEGGS ALQRDLYLTV SLTLKLLSDV DFPATFSEAS RAKELTEVNI PIDLLAETLQ KELHPPKNIH PAFVISVWRT KSEQGRFHEL EGDNGSFPVG VQPVPAERRV IFFVTGLREQ VIIKYDLQDE RVIEISLKEI GHDLYVSNAR RSAFRLHAQI GIDFAAVSDA SELVELLYSR YRSTRDDNDL EESLPAGVEA KSPYDVLEAH DAGETRISAK ALWQALAESD ELNATRITVR AGVQKVPHEK YSWLVPYELE EGVLDFSEGE KIELHERGTD PMKGTEAWFR VGLISPDIGK DVLRVLPTSN RLKITEGKTF FVRGSFETSA SERRVAAMRR VLGGGASIPK IQEYFDPHLS VQPYQFPMAA LNLIDSLGLN DQQRDALLQS FKNGPISLLQ GPPGTGKTKF ISSFVHLALS RGLAKNILLV SQSHEAVNNA LEKVSDLAAS NEVGLSMVRV GSATMVSKKL RSVHEDARRQ IYREKFDAEI RERIRTVGYQ LGLPSAYVND ASDVFMTLGQ LLSRIEFLQQ ADNPNRDADE GMRSAQIRRL KERFCEIASS RFDLEVSTES NLRDAMEGFL SKVAATNGSP SPEKCQKLER LFWLSKEFSD VLRSPHSNFT SFLSRTARVV AGTCVGVGKH MLGIVDHVYD WVIVDEAARA SPMELVVAMQ AGRRVLLVGD HLQLPPMYPK AVEEKTSQLL GIGRADFRKI NNFQRAFSSE YGRSVGRTLL KQYRMASSIN RVVSNCFYEG ALTVDREAPI AAYEKLPEYL AKEVVWIDTA DQGRASFHKE LPGGYGALVN EVEANIVVSV VREIAMSKEF VEAIRIKVHQ SDSAPIGIIT MYAAQRDLIR RKLDQADWAG DIRDLFTVGT VDSYQGKENC IIILSVVRND TSSVVGFLSE PERINVALSR AQDRLIVVGS TTMWSGRAGT PLKKVLDEVM LMSKDGQAQL VQSRALKGGV
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