| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4939 |
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| Symbol | |
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| ID | 4015891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | - |
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| Start bp | 44740 |
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| End bp | 45903 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637944579 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_551711 |
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| Protein GI | 91790760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG TGCCGTCGGA CGTAGGACTT GGCCCCCAAA ACTTTTTTAG TCGTCTGCCA
TCTCTGGCTT GGTCGGGTTG GAAGCGCTCG TCGGGTCGCC GAAGCTTGCT GGCCGCGTTG
TTAGTTTTTT TGGTTGCCGC GTTTTATTGG GGATTGATTG CTTCAGACCG CTATATCAGC
GAAGCGCATG TAGTCGTCGA CAAAACCGAT CTGCAAAGCA GCACAACCGT CGATTTCAGC
AGCCTGATCA CCGGAGGGCG CAACAATCAT GATCTCCTTC TTCTTCGGGA TCATTTGCGT
TCCGTAGATA TGTTGAACAA GCTCCATGGG CGCCTCAATT TGCGTGCGCA TTACAGCGAC
AGGCAAAGAG ATCCGCTTTC CCGGCTCTGG TCGGCTGACG CATCCCAGGA AAGGTTTTAC
CAGCACTACC TGAGCCGGAC CAGCATCGAG ATGGACGATC AGGCCGGTGT CCTGGTCATT
CGCGCCCAAG CCTACGACGC TGCGACTGCG CAAAAAATCG CGGCTGCCTT GATGCAGGAA
GGCGAAGCAT TTCTGAACAA CATGGCCCAC CAGTTGGCCA GAGAGCAGGT GATTTTTCTG
GAGCAACAGG TCGCTCAAAG CAGCCAAAGA GCCGTCGTAT CACGCAGGGC GCTCATCAAC
TACCAGAACT CAACTGGCAT GATCTCGCCC GCGTCAAAGG CGGAGAGCCT GACCGCCATT
GCCGCCCGCT TTGAAGGGCA AATATCTGAT CTCAAGGCAC GCAGGGCTGG CATGCTCGGC
TATCTCAGTC CAGATGCCCC GGATGTTGCG CAAATCAATC TCCAGATCGC TGCACTCGAG
CGTCAGGCGG CACTGGATCA AGGTCGATTG GCCTCGCCTG CTGGCAATAC ATTGAATCGA
AACATCGAGG AATTCCAGCG TCTTGAGGCG GAAGTTGCTT TTGCACAAGA TGTTTACAGG
ACGTCGCTCG TCGCGCTTGA AAGAGGTCGT CTCGAAGCAG TACGCATGCT TAAAAAGCTG
TCGATCCTGC AATCTCCCAC TTTGGCCGAA TACCCGGTTG AACCGCAGAG AATCTATAAC
ATTCTGATTG TTGCGATAGG CCTGCTCATG CTGCTTGGAA TCTCCAGTCT TTTCATCGCC
ATCATTCGAG ATCACCAGGA CTAA
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| Protein sequence | MSEVPSDVGL GPQNFFSRLP SLAWSGWKRS SGRRSLLAAL LVFLVAAFYW GLIASDRYIS
EAHVVVDKTD LQSSTTVDFS SLITGGRNNH DLLLLRDHLR SVDMLNKLHG RLNLRAHYSD
RQRDPLSRLW SADASQERFY QHYLSRTSIE MDDQAGVLVI RAQAYDAATA QKIAAALMQE
GEAFLNNMAH QLAREQVIFL EQQVAQSSQR AVVSRRALIN YQNSTGMISP ASKAESLTAI
AARFEGQISD LKARRAGMLG YLSPDAPDVA QINLQIAALE RQAALDQGRL ASPAGNTLNR
NIEEFQRLEA EVAFAQDVYR TSLVALERGR LEAVRMLKKL SILQSPTLAE YPVEPQRIYN
ILIVAIGLLM LLGISSLFIA IIRDHQD
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