| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4898 |
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| Symbol | |
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| ID | 4012433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 5187277 |
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| End bp | 5188284 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637944540 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_551672 |
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| Protein GI | 91790720 |
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| COG category | [K] Transcription
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.340772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATCCC TACCCTCCAG CTTTGACGCA GTGAACTTCA ATGCCGGGCA GGCGCTTGCC
CTGGCCCGCA AGACCTTTGA AATAGAGGCG GCGGCGGTGC AGGGGCTGGC CGGCCGCGTG
GGGCCGGAGT TTGCCCGGGC GGTCGAGCTG ATGCTGACCT GCCGCGGCCG CGTGGTGGTG
ATGGGCATGG GCAAAAGCGG CCACATCGGG CGCAAGATTG CCGCGACGCT GGCCTCCACC
GGAACCCCCG CCATGTTTGT GCACCCGGCC GAGGCCAGCC ATGGCGATCT TGGCATGATC
ACGGGCCTGG ACGTGGTGCT GGCCATTTCC AACAGCGGCG AGAGCGAAGA ACTCACGTCC
ATCCTGCCGG TGCTGAGCCG CCAGGGCGTG CCGCTGGTGG CCATCACCGG CGGCTTGCAG
TCTGCGCTGG CCAAACAGGC GCGCGTCACG CTGGACAGCA GCGTCGCGCA GGAAGCCTGC
CCGCTGAACC TGGCGCCGAC TGCCAGCACC ACCGCCCAGC TCGCGCTCGG CGATGCGCTG
GCTGTAGCGC TGCTGGATGC GCGCGGTTTC AGGGAAGAAG ACTTTGCCCG CTCCCATCCC
GGTGGCGCGC TGGGTCGCAA GCTGCTCACC CATGTGAGTG ATGTCATGCG CAGCGGCGAC
GCGGTCCCGA AGGTGGGGCC CGACACCAGC TTTACCGAGC TCATGCGCGA GATGAGCGCC
AAGGGCCTGG GCGCTTCTGC GGTGGTGGAC GCGCAGCAGC GCGTGCTCGG CATCTTCACC
GATGGCGACT TGCGCCGTCT CGTTGAAAAG GGCGTGGACC TGCGCAGCAG CAGGGCCGGT
GACGTCATGC ATGCCCATCC GCGCACGGTG CGGCCGGACG CCCTGGCCGT GGAAGCGGTG
GAGCTGATGG AGCAGTTCAG CATCACCAGC GTGCTGGTGG TCGACGACGC CGGCGTGCTG
TGCGGCGCCC TCAATACCAA CGACCTGATG CGGGCCAAGG TCATATGA
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| Protein sequence | MVSLPSSFDA VNFNAGQALA LARKTFEIEA AAVQGLAGRV GPEFARAVEL MLTCRGRVVV
MGMGKSGHIG RKIAATLAST GTPAMFVHPA EASHGDLGMI TGLDVVLAIS NSGESEELTS
ILPVLSRQGV PLVAITGGLQ SALAKQARVT LDSSVAQEAC PLNLAPTAST TAQLALGDAL
AVALLDARGF REEDFARSHP GGALGRKLLT HVSDVMRSGD AVPKVGPDTS FTELMREMSA
KGLGASAVVD AQQRVLGIFT DGDLRRLVEK GVDLRSSRAG DVMHAHPRTV RPDALAVEAV
ELMEQFSITS VLVVDDAGVL CGALNTNDLM RAKVI
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