Gene Bpro_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4842 
Symbol 
ID4012493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5129935 
End bp5130975 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID637944484 
Productbeta-lactamase-like 
Protein accessionYP_551616 
Protein GI91790664 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTTCG AACAAGTCGC CACCGGGGGT TGCCAGTCCT ACCTGTTGGG CTGCCCTGAC 
ACCTGCGCCG GGGCGGTGAT CGATCCCGAG GTCAGCCAGG TCGACCGCTA CCTGGCGCTG
GCCTCGCGTG ACGCGCTGCG CATCCACTTC GTGATCGACA CGCACACGCA CGCCGATCAC
TTCTCGGCCG CGCGCCAGCT GGCCGACCGG CTCGGCGCGA TGACCGTCAT GCACCGGGCC
AGCCCGGCGC CCGGCGTGGA CCTGCGCGTC GATGACGGCG AGATGATCGT GCTCGGCAAG
TTGCGGCTGC AGGTGCTGTA CACGCCCGGG CACACCGTGG ACTCGATGTG CCTGGTTGCC
GACGACCGGG TCTTCACCGG CGACACGCTG CTCATCGGTG GCACCGGGCG CACCGACCTT
CCCACCGGCG ATCCCGAAGC GCTGTACGAC AGCCTGTTCG GGCGGCTCCT GAAGCTCGAT
CCGGCGCTGC TGGTGTACCC GGCCCACGAC TACAAGGGCC GCAGCCACTC GACCATCGGC
GATGAAATCG CCACCAACCC ACGTCTGCAG CGGACAGACC GGGCGGCGTT CGTGGAGATG
ATGAAGAGTC TCGACCTGTC CATGCCCACC CACCTCACGG AAGCGCTGCG CACCAACATG
AGCGGTGGCA AGACCGTGGC GCAGATGCTG GCCGAGGCTG CCGCCTGCGT GCCCTTCATG
TCCATGGCCG AGTTGCGATC TCGTGTCGAG GCAGCACCGG CCGGTCTGAT CGTGCTCGAT
GTACGCGAAC GTGACGCCTA CGAGGCCGGG CACATTCCCG GCGCGCGGCT GCTGCCGCGC
GGCCAGCTGG AGCTGCGCGT CGACAGCGAG CTGCCCGACC CGACGGCCCG CATCGTCACC
TGCTGCGAGT TCGGCCGTGT CTCGACGCTG GCCGCGGCCA CGCTGCGCAC CATGGGCTTT
CAGCGCGTGG TTGCGCTTGA CGGCGGCATG AAGAGCTGGC GCGAGGCGGG CTACCCGGTG
CGCGCGGGGC CGGCGGCCTG A
 
Protein sequence
MIFEQVATGG CQSYLLGCPD TCAGAVIDPE VSQVDRYLAL ASRDALRIHF VIDTHTHADH 
FSAARQLADR LGAMTVMHRA SPAPGVDLRV DDGEMIVLGK LRLQVLYTPG HTVDSMCLVA
DDRVFTGDTL LIGGTGRTDL PTGDPEALYD SLFGRLLKLD PALLVYPAHD YKGRSHSTIG
DEIATNPRLQ RTDRAAFVEM MKSLDLSMPT HLTEALRTNM SGGKTVAQML AEAAACVPFM
SMAELRSRVE AAPAGLIVLD VRERDAYEAG HIPGARLLPR GQLELRVDSE LPDPTARIVT
CCEFGRVSTL AAATLRTMGF QRVVALDGGM KSWREAGYPV RAGPAA