Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4825 |
Symbol | |
ID | 4012476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 5110298 |
End bp | 5112697 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637944468 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_551600 |
Protein GI | 91790648 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.976806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC AGCAGAACCG GCACATTTTG CTGGTCGACG ACATGCCCTC GATCCACGAG GACTTCCGCA AGATCCTCGC GGCCAAGCCG GGGGCGCGCG ATCTGGACGA TGCCGAAGCG GCCCTGTTTG GCCAGGCCGC TTCGCCGTCC GGTGAGGGCT TCGAACTGGA CTCGGCCTAC CAGGGGCTCG AAGGGGTGGC CAGGGTCGAG GCCGCCGTTC AGGCCGGCCG TCCTTATGCC ATGGCCTTCG TGGACATGCG CATGCCCCCG GGCCTGGACG GCGTGGAGAC GATAGCGCGG CTCTGGCGCA TCGACCCACA GGTGCAGATC GTGATCTGCA CGGCCTACTC CGACTACCCC TGGGAGGAAG TGCTGGCGCG ACTGGACGCG CAGGACCGCC TGCTCATCAT CAAGAAGCCG TTCGACATGA TCGAGGTCAG CCAGCTGGCC AGGACGCTGA CCGCCAAATG GGAACTGACG CGGCAGGCGA CGCTGCAGAT GGGCGGCCTG GAGAACGCCG TCAAGGAGCG GGCCAGGGCA TTGCGCGCCA GCGAATCGCA GTTGCGCCAG ATCACGGACA CCGTGCCGGC CTTGATTGCC TACGTCGACG CTGAACAGCG CTTTCAGTTT CACAACCTGG CCTATGAAGA AGGCTTTGGC CTGAAGCGCG ATCAGATCCA CGGCAAGACC ATGCGCGAGA TGATGGGTGA TGCGCTTTAC GAAAAAGAGC GCGGCAAGAT TGAAGAAGCC TTGTCGGGTT ACGCGGTGCA GTATGACCGC GTGCAGAAAA CTGCGGATGG CCAGCTGCGC GACTACATCA TGCAGTACTT TCCGCGCTAT GGCGAAGACC AGGATGAAGG CAAGGTGGTT GGACTTTTCT CGCTGGGCAC CGATGTGACC GAGCTCAGAC GCATCGACCG CATGAAGAGT GAATTTGTCT CTACCGTCAG CCATGAGCTG CGCACGCCGC TGACCTCCAT CCGCGGCTCG CTGGGCCTGA TTGCCGGTGG TGTTGCCGGA GAGCTGCCGG CCATGGCCAA GAGCCTGGTT GGCATTGCCA GCAACAACTG CGAGCGCCTG ATCAGGCTCA TCAACGACAT TCTTGACAGC GAAAAAATCG AGTCGGGCAA GATGCACTTT GAGCTGCAGC AGGTGGAACT GCAGCCCCTG CTGGCGCAGG CCCTGGCGGC CAATGAAGGC TTTGCAGGCC AGCACAACGT CAAGCTGGCC CTCGATGCCC CGGCAGACGC GGTGAGGGTC AGCGTCGACA GCGACCGGCT CACCCAGGTC GTCACCAACC TGCTGTCCAA TGCCGTGAAA TTTTCACCGC CGGCGTCCTG CGTACATATC AGGCTGCTGC GCAGCGGCGG GCGGGTCCGG GTTGAAGTGG CCGACAGCGG CCCCGGCATC CTTGAAGAAT TTCGCAAACG CATCTTCCAG AAATTCTCGC AAGCCGACAC ATCGGACACC CGGCAAAAGG GTGGCACGGG CCTGGGCCTG AATATCTCGC GCGCCATCGT GGAGCAGATG GGCGGCAGCA TGGGGTTTAC CACCAAGGCC GGTGTGGGGA CCGTTTTCCA CTTTGAACTG CCCGAAGCGA GCCCGCTGCC GGTTGAAGAC CGGGACAGCG CCGCGCCGCG GCCCCGTATC CTGATTTGCG AAGATGACCC CGACATCGCG CGCCTGCTCA ACCTGATGCT TGAAAAAGGC GGCTTTGATT CGGACATGGT GCACAGTGCT GCGCAGGCGC TGGAACAGGT GGCGCGCCGG CCCTACGCCG CCATGACGGT CGACCTGAAC CTGCCCGACC AGGACGGCGT CAGCCTGATC CGTGCGCTGC GCCGCGACAG CCGCACGCGG GACCTGGCCA TTGTGGTGGT TTCGGCCAAT GCCAGAGAAG GTGAACTCGA ATTCAACAGC CAACCGCTGG CGGTTTCGAC CTGGCTCGAG AAACCTATCG ACGAAAACCT GCTGATCCTC AGTTTGCACC GCGCCATTGA CAACATGGCG GAAGGCAAGC CGCGCATTCT GCACGTCGAG GACGACCTGG ACATCCAGCG CATTGCCGCT GCCATTGCCC AGAACTTCGC AACCTTTGAA TTCGCCTGTA CCCTGCAGGA AGCGCGGGAC CAGCTGGCCA GCCATCATTA CGATCTGGTA CTGCTCGACC TGACGCTCAA AGACGGTTCG GGCTGGGAAC TGCTAAGCAC CATCGAAGCG CTGGACCCCG CACCGCCGGT CGTCGTGTTC TCTGCCAGCA AGCTGAACAT GATGGAAAGC CAGCGCGTAG AAGCGGTGCT GGTAAAAGCA GATACCTCCA ACGAGGAGCT GATCAGGGTC CTGCAGCGGG TGCTCGACGA CAGCTTGTGG GGAACGGTCG ATTCACCCCT GAGTACTTAG
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Protein sequence | MTPQQNRHIL LVDDMPSIHE DFRKILAAKP GARDLDDAEA ALFGQAASPS GEGFELDSAY QGLEGVARVE AAVQAGRPYA MAFVDMRMPP GLDGVETIAR LWRIDPQVQI VICTAYSDYP WEEVLARLDA QDRLLIIKKP FDMIEVSQLA RTLTAKWELT RQATLQMGGL ENAVKERARA LRASESQLRQ ITDTVPALIA YVDAEQRFQF HNLAYEEGFG LKRDQIHGKT MREMMGDALY EKERGKIEEA LSGYAVQYDR VQKTADGQLR DYIMQYFPRY GEDQDEGKVV GLFSLGTDVT ELRRIDRMKS EFVSTVSHEL RTPLTSIRGS LGLIAGGVAG ELPAMAKSLV GIASNNCERL IRLINDILDS EKIESGKMHF ELQQVELQPL LAQALAANEG FAGQHNVKLA LDAPADAVRV SVDSDRLTQV VTNLLSNAVK FSPPASCVHI RLLRSGGRVR VEVADSGPGI LEEFRKRIFQ KFSQADTSDT RQKGGTGLGL NISRAIVEQM GGSMGFTTKA GVGTVFHFEL PEASPLPVED RDSAAPRPRI LICEDDPDIA RLLNLMLEKG GFDSDMVHSA AQALEQVARR PYAAMTVDLN LPDQDGVSLI RALRRDSRTR DLAIVVVSAN AREGELEFNS QPLAVSTWLE KPIDENLLIL SLHRAIDNMA EGKPRILHVE DDLDIQRIAA AIAQNFATFE FACTLQEARD QLASHHYDLV LLDLTLKDGS GWELLSTIEA LDPAPPVVVF SASKLNMMES QRVEAVLVKA DTSNEELIRV LQRVLDDSLW GTVDSPLST
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