| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4569 |
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| Symbol | |
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| ID | 4012766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4837183 |
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| End bp | 4839099 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637944218 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_551350 |
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| Protein GI | 91790398 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.375383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAACAA CATCAACCGC GTTGGCATTG CGTCAGGCGC GGCTGCATCT GCTGGAACAC
GGTGACTGCC CGTCAGCCGG CATCGACGAC CGGCTTGCCC GTTCGTGGCG GCGTAGCCTG
GCAGCCGGCC TGTCGCCCAC CGACCGCCTG GCCGACACCG AACACGCCAG CGACGGCAAT
CTGCGCCGCG CACTGGCGTT CAACCACGAT CTGCTCGCAC ATTCCCTGCC GGTGATGGAA
TACCTCTTCG AGCAGGTGCG GCACAGCCAG AGCATGGTCG TCCTGGCCGA CCCGCGTGGC
ACGCTGATCA ACACCTTGGG CGATGCCGAT TTTCTCGACA AGGCCGAACG CGCGGCGCTG
ACCTCCGGCG CCTCGTGGCA CGAGCAGCAC CGCGGTACCA ACGCCATTGG CACCGCGCTG
GCCGAAGGCA GCGGCGTCGA AATTCACGGC AGCGAGCACT TTCTCGAGCG CAACGGATTT
CTCACCTGCG CGGCCGCGCC CATCATGTCG GCCAGCGGCG AGCTGATGGG CATTCTCGAC
CTGTCCGGCG GCCAGCGCAG CCGGCATCCG TTTGCCCTGG GGCTGGTCAG CACGGCGGCG
TGCATGATCG AAAACCGCCT GGTCATTTCC AGCTGCCGGC AATACATCCG CCTGCACCTG
CACGCTCACT TCGAGGGCAT AGGCAGCGTG GCCGAGGGCA TCATCGCCCT CTCGGACGAC
GGCTGGATCG TTGGCGCCAA CCGCAAGGGT CTGGCCCTGC TTCATCTGGC ATGGTCTGAT
CTGGGCGCCA CGCCGCTGGC CCGCGCGATC GATGTGCGCC TTGACGAATT GCTGTCCCGG
CACAAGCGCC GTCCCGGCCA GCCGACGCAG GTGCAGCTGC ACGACGGCAC CACGCTCTTT
GTGCAGGTGC ATGCCGAGCC GTCAGGACTG GTCGCCGCCC CGGCGTCCGG CACTGGCAAG
GTCGGCGCCA CGCAGCCCGA TGCGCTGGCC CGCCTCGACA CCGGCGACCT GCGCTGGCTC
AGCGCTGCCC AGAAAGCCCG GCGCGTGGCC GGTAAGCCCA TCCCGCTGCT GATCCAGGGT
GAATCGGGGG TGGGCAAGGA GCTTTTCGCC CGCGCCACGC ACGACAGCGG ACCCCGCCGT
GACGGCCCCT TCGTGGCCAT CAACTGCGCC GCCGTGCCGG AAAACCTGAT CGAAGCAGAA
TTGTTTGGCT ATGCACCAGG AGCGTTTACT GGCGCGCGGC GTGAAGGCAG CGCGGGCCGT
CTGCGTGAAG CCCACGGCGG CACGCTTTTT CTCGATGAAG TCGGCGACAT GCCGCTGAGC
ATGCAGACCC GCCTGTTGCG CGTGCTGCAG GAGCGGCAGG TCACCCCGCT CGGCGGCGGC
CGGCCGGTTG ATGTCGATTT CGCCCTGATC TGCGCCACCC ACCGCAATCT GCGCGAAGCG
GCCGACAAGG GCAGTTTCCG CAGCGATCTC TACTACCGCA TCAACGGCCT GACTGTCCAT
CTCCCGCCCC TGCGCGAACG CAGCGATTTT GGGGTGCTGA CCGAGCGCCT GCTGGCCAGC
TTCAATCCCG AATGCGATAT TCGCCTCGCA CCTGATCTGT TGGCGCGATT GAGCCGGCAT
GCATGGCCTG GCAACCTGCG CCAGTACGCC AGTATGCTGC GCACCGCCAG CGCCATGCTG
GACCCGCATG AGGAATGTAT CGACTGGCAG CACTTGCCAG ATGACATCAA GGAAGAACTC
GCCGCCTTGA CGCAACCGGT CACCTCCCCG AGCGCAGGGG GCCCATCACA AAACCTCGAC
GAACTGTCCC GCGCGGCCAT CCGGCAGGCG CTGGAGAGCA GTTGCGGCAA TATCTCGCAA
GCCGCCAGGC GCCTCGGGAT CAGCCGGCAA ACGCTTTACC GCAAACTCAA CGCCTGA
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| Protein sequence | MRTTSTALAL RQARLHLLEH GDCPSAGIDD RLARSWRRSL AAGLSPTDRL ADTEHASDGN
LRRALAFNHD LLAHSLPVME YLFEQVRHSQ SMVVLADPRG TLINTLGDAD FLDKAERAAL
TSGASWHEQH RGTNAIGTAL AEGSGVEIHG SEHFLERNGF LTCAAAPIMS ASGELMGILD
LSGGQRSRHP FALGLVSTAA CMIENRLVIS SCRQYIRLHL HAHFEGIGSV AEGIIALSDD
GWIVGANRKG LALLHLAWSD LGATPLARAI DVRLDELLSR HKRRPGQPTQ VQLHDGTTLF
VQVHAEPSGL VAAPASGTGK VGATQPDALA RLDTGDLRWL SAAQKARRVA GKPIPLLIQG
ESGVGKELFA RATHDSGPRR DGPFVAINCA AVPENLIEAE LFGYAPGAFT GARREGSAGR
LREAHGGTLF LDEVGDMPLS MQTRLLRVLQ ERQVTPLGGG RPVDVDFALI CATHRNLREA
ADKGSFRSDL YYRINGLTVH LPPLRERSDF GVLTERLLAS FNPECDIRLA PDLLARLSRH
AWPGNLRQYA SMLRTASAML DPHEECIDWQ HLPDDIKEEL AALTQPVTSP SAGGPSQNLD
ELSRAAIRQA LESSCGNISQ AARRLGISRQ TLYRKLNA
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