| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4463 |
|---|
| Symbol | |
|---|
| ID | 4012855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4716405 |
|---|
| End bp | 4718924 |
|---|
| Gene Length | 2520 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944116 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_551248 |
|---|
| Protein GI | 91790296 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAC CCTTTCGCGT AACCGTCAAC CTGGCCCTGG GCATGGGGCT GGCCCTGATC
GTCCTGAGCA CGGCGGTGTC GTACCTCACG ATCAATGCGC TGATCAGTGA TGCACAGCAG
GAGACGCAAA CCCGGGAAAC AGTACTGCTT CTGGAGGAAG TCGTTTCCCA GTTCAAAACC
GCGGAGTCCC TGCAGCGGCG CTACCTCCTC ACCCATACGG CAAATGACCT GATGACGTAC
CGGCAGGCCC GGGCCGGTAT CCAACAGGTG CTGCTGCGCG TGTCCTCCGG GCAAACGCCA
ACGGGTCAGT GGCAGGATAT GCTCGCGCTG AAAAACCTGA TCGCCCGTCG GGTTGAACTG
ATGGAGCAGA CCATCGCGGC CCGGCAACAG GCGGGGCTGG AGGCTGCCGC GGCCCTGGTC
GGCAGTGACC TGAACCGTCA GCTTCACCAG GAGATTGACG GTTTGGCGCA GCGCATCAAA
AGCGCTGAGA CCCTGACGCT GGGGCGCTCA AAAGAAGAAG CCCGGCAGAG CGCCCAGACT
GTCGAGTGGT TGATCCTGTC AGGTGGCGTG CTCTCGCTCG CCGTCCTGGC ATGGGCCATC
CAGATGATCG GCCGTTTTCA GGCCCAGCGC CGTCTTGTGG AGGCGAGGCT CTCCGACAGC
GAAGCCATGA GCCGGGCCAT CACCGAGAGC ATGGCGGAAG GGGTGATGAC GGCCACCCCG
CAAGGTGTCA TTGTCGGTGC CAACAGCGCC GCGAGAACTC TCTTCGGCTA CACGCTTGAC
GACCTGATCG GTCGCCAGGT GGCTACGCTG CTGCCGGCGC GCTACCAGTC TGATTTCACC
GCGTTCTATG AGGCCCTGGC CAGCCGCCCC CGCGGTTTCA GGGAGTCCGG CACCGAAGTC
AGCGGGGTGC GCCGCGACGG CACCGAATTT CCGGTCCATG TGTCTTTCGG AGATGTCCAT
GTGGGCGGGC AGCGGCTGTT TACGGCCATC ATTCGCGACA TCACCGAAAG CAGGCGGATC
AGCCAGGCAT TGCGCGACAG CGAAGCGCAG CTGCGCCAGC TGACGGATAC CGTTCCTGCG
CTGATTGCCT ATGTGGACAA AGACCAGCGC CTCCAGTTCC ACAACAAGGC CTATGAAGAG
GCATTTGGCC TGACACACGA GCAAATTCAC CAGAAAACCC TGCTGGAGGT GATGGGGGAG
GAGTTTTACG CAGGGGTGAA AGACCACGTC GCGGAAGCGC TGGCGGGTTA TTCGGTGCGG
TATGAGCGTG AGCAGGTGAG CGTGGGCGGC GGGCGCCGCG AATACGTGAT GAATTATTTT
CCGCGCTACG GTGAGGGCAA GGCGTGGGAC CAGGCCATCG GATTCTTCGC GCTGGGCAAC
GATGTCACCG AACTCAAGCG CATTGACCGC ATGAAAAGCG AGTTCGTCTC CACCGTCAGC
CACGAATTGC GTACCCCCCT CACGTCCATA CGCGGCTCGC TGGGGCTGGT CTGGGGCGGC
GTCACCGGCG AGTTGCCGGA GAAGGCGAAA GCGCTGGTGG GCATTGCCAA GAACAACTGT
GAACGGCTCA TACGCCTGAT CAACGACATT CTTGATAGCG AGAAAATCGA GTCCGGAAAA
ATGCGCTTTG AGATGCAGCC GGTGGAGCTG GATCCCCTGC TGGAGCAGGT GCTTGCCGCG
AACGAGGGCT TCGCCGCGCA GCACCAGGTG AAGCTGGTGC TGCGTACCGG CCGTCGTCCG
GTGCTCGTCA ACGTGGACAG CGATCGCCTG ACCCAGGTGG TGACCAACCT GCTGTCGAAC
GCCATCAAGT TCTCCCCGGC GGAAGGTACG GTGCAGGTTC TGCTGCGCAG TGGGGCGGGG
CGCGTACGCG TCGAGATCAG CGACAAGGGA CCTGGCATAC CTGAAGAGTT TCGCCAGCAC
ATCTTCCAGA AGTTTTCCCA GGCTGACGCG TCTGACACGC GCCAGCGGGG CGGAACCGGC
CTGGGCCTCA GCATTTCCAA GGCCATGCTG GAGCGCATGG AAGGCAGCAT TGGCTTCACG
ACGGAGCAGA ACGTGGGAAC GACTTTCTTT TTCGAATTGC CGGAATGGAA GGAGGCGCCG
CCCGTGACGG CCCCGATGAG CCTCGATGCG GTGGCCCGGC CCCGGATTCT GGTGTGTGAG
GACGATCCGG ATGTTGCAAA GCTGATTGGC ATGATGCTGG ACAAAGGCGG TTTTGATGCG
GATGTGGCCC ACACGGCGGC GCAGGCACGC GACTACCTCA AGATGGAGTC CTATGCGGCA
ATGACCGTTG ACATCAAACT GCCCCATGAA AATGGTCTGG ATCTGATTGC CGAGTTGCGC
CGGGACAAAC GCACCGCCGG CTTGCCCGTC GTGGTGCTGT CGGTGACGCC GGAAGAGGTG
CAGTTGCGCG CCGAGCGGCG GGCGCTGGAG ATTTCCGACT GGCTGGAAAA GCCGCTCGAT
GAGCAGCACA TGCTCGACTG CCTGCGCCGG GCCGTCAGGA GCGGGCGAGC CCGCCAATGA
|
|---|
| Protein sequence | MKLPFRVTVN LALGMGLALI VLSTAVSYLT INALISDAQQ ETQTRETVLL LEEVVSQFKT
AESLQRRYLL THTANDLMTY RQARAGIQQV LLRVSSGQTP TGQWQDMLAL KNLIARRVEL
MEQTIAARQQ AGLEAAAALV GSDLNRQLHQ EIDGLAQRIK SAETLTLGRS KEEARQSAQT
VEWLILSGGV LSLAVLAWAI QMIGRFQAQR RLVEARLSDS EAMSRAITES MAEGVMTATP
QGVIVGANSA ARTLFGYTLD DLIGRQVATL LPARYQSDFT AFYEALASRP RGFRESGTEV
SGVRRDGTEF PVHVSFGDVH VGGQRLFTAI IRDITESRRI SQALRDSEAQ LRQLTDTVPA
LIAYVDKDQR LQFHNKAYEE AFGLTHEQIH QKTLLEVMGE EFYAGVKDHV AEALAGYSVR
YEREQVSVGG GRREYVMNYF PRYGEGKAWD QAIGFFALGN DVTELKRIDR MKSEFVSTVS
HELRTPLTSI RGSLGLVWGG VTGELPEKAK ALVGIAKNNC ERLIRLINDI LDSEKIESGK
MRFEMQPVEL DPLLEQVLAA NEGFAAQHQV KLVLRTGRRP VLVNVDSDRL TQVVTNLLSN
AIKFSPAEGT VQVLLRSGAG RVRVEISDKG PGIPEEFRQH IFQKFSQADA SDTRQRGGTG
LGLSISKAML ERMEGSIGFT TEQNVGTTFF FELPEWKEAP PVTAPMSLDA VARPRILVCE
DDPDVAKLIG MMLDKGGFDA DVAHTAAQAR DYLKMESYAA MTVDIKLPHE NGLDLIAELR
RDKRTAGLPV VVLSVTPEEV QLRAERRALE ISDWLEKPLD EQHMLDCLRR AVRSGRARQ
|
|---|
| |