| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4383 |
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| Symbol | |
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| ID | 4012954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4624654 |
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| End bp | 4625721 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637944032 |
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| Product | putative porin precursor transmembrane protein |
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| Protein accession | YP_551169 |
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| Protein GI | 91790217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TCATAATTTC CTTAACGTTG CTGGCCGTCT CTGGCTTTGC AACTGCTCAA
TCGTCAGTTA CGCTGTTTGG TATTGCTGAC GCGACTTTTC AACGCGGCTC GGGCAGCAGT
GCTAGTGCCA CGCAAATTGG CTCGGGGGGC AATTCTTCGT CGCGCATCGG CTTTCGTGGC
GTTGAAGATC TGGGAGGCGG CCTCTCGGCC AGTTTCTGGC TCGAAGCTGC TTTTTCGCTG
GACAACGGCA CTGGTGGCAC GACCAATACG AACAACCAAA CTACCGGAAC GACTGGTGGC
GGTGGTTTGA CCTTCGGTCG CCGTTCCACG GTCAGCCTCT CTAGCGGCTG GGGCGAAGTA
CGCCTCGGGC GCGATTACTC TGTGCAGTAC TACAACCGCT TCGAGTTTGA TCCTTTCGGC
AACAACGGCG TGGGCTCCTC GCAGACCAAT GTGGGTTCGC TCGGAGGGCC GGTGTCCTCG
CGGGTTTCCA ACGCGATCAT GTACTTCCTT CCGGCGGATC TCGGCGGCTT CTATGGCGAA
TTGCAGCACT ATCGAGGTGA AAACGCGAGC AATGCCGGAA CAACCGCGGA TGATGGCACA
GGCAGTGGAG CTCGCATGGG CTACCGCGCG GGGCCGTTAA ATGTGGCGAT CGCCCATGCT
CGCACGCAGT ACGCACGCAC TGCGACCACG GGTGACATTG CCTCCAGCAA TATCGCTGCA
CGCTACGAGT TCGGTGATTT CACGGCTATG GGCGGCTACT ACCGCGACCA GGTGGGCACG
ATCGCAGGGT TGACGGGCCG TGGCGCGCAG ATCGGTGGGA TATACCGCAT AGGCTCGGGA
GACATCAAGG CGCAGTGGTC GAACTACAAA ACCACTGCTG CTGGCAATCC TGAAACCAAG
AAGCTCTCGC TGGGCTACGT TCACAACCTG TCGAAGCGGA CCGCAATCTA TGGCACATAT
GCGCGGGTAC GCAACAGTGG AGGCGCGACT ACTGCGCTCA ACGGATCCGT CACTGCGGCG
AACCAGTCAT CTTCAGGGTT TGACTTGGGT ATACGTCATT CCTTTTGA
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| Protein sequence | MKKIIISLTL LAVSGFATAQ SSVTLFGIAD ATFQRGSGSS ASATQIGSGG NSSSRIGFRG
VEDLGGGLSA SFWLEAAFSL DNGTGGTTNT NNQTTGTTGG GGLTFGRRST VSLSSGWGEV
RLGRDYSVQY YNRFEFDPFG NNGVGSSQTN VGSLGGPVSS RVSNAIMYFL PADLGGFYGE
LQHYRGENAS NAGTTADDGT GSGARMGYRA GPLNVAIAHA RTQYARTATT GDIASSNIAA
RYEFGDFTAM GGYYRDQVGT IAGLTGRGAQ IGGIYRIGSG DIKAQWSNYK TTAAGNPETK
KLSLGYVHNL SKRTAIYGTY ARVRNSGGAT TALNGSVTAA NQSSSGFDLG IRHSF
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