| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4315 |
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| Symbol | |
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| ID | 4013001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4548058 |
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| End bp | 4549131 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943966 |
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| Product | putative transmembrane outer membrane porin signal peptide protein |
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| Protein accession | YP_551104 |
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| Protein GI | 91790152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.320108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA GACAAATTCT GGCCGCTGCA GCGGTATCCC TTGCCATGCC AGTCATGGCG
CAAACCGCTT CCTCGGTGAC CCTGTACGGG ATCCTCAATG TGGCTGTCCG CTCCCAGACT
GGCCTGACGA GTACCTACGG GCGATCGCCG GTTGACACCA CCGTTGTTGC GAGCGGCGTG
GGCCCCACGA GCCGCTGGGG CCTTCGCGGA ACCGAGGATC TTGGCGGCGG GCTGCGCGCG
ACGTTCAATC TGGAATCTGG AATCAACGTC GATACGGGCA CTCAGGCCAA TGCGGTCACC
TACTTTGACC GCGCCTCGAC CGTCGGACTC GCCGGAGCGT GGGGTACGAC GACAGTGGGT
CGTCAGAACA CATTGCTCGC TGACTCCGCT GGCGTTGCCG ACCCGATCGG GCTCAGGTTC
GCGGGTCTGA ACCCGAACAT TCAGAACGTC AGTCTCACGG GCCATCAGCT CGGTGTCGAG
TACGGCACCA CGGGCTCCAG TACTGCGTCG AACCGGCAGA ACAACTCGAT CAAGTACTCG
GTTCCGATCG GCCCCGTGGT GGCTCGCGCG ATGCACAGCT TTGGCGAAGT GGCGCAGTCG
TCCTCCAGGA AAAGCACTTC AGGACTGGGA GTCGACTACC TGACGGAAGA GCTGAAGATC
ACGACGGCGT ACACCCGCTT CAAGGATGCC AACGACCGGC GGTTGACGGC CGCGAACGTG
GGCGCCAGCT GGCTCGCACT TCCGTCGCTG CGCGTCATGG CGAACATGGG TTACAACCGC
GGCTTCACCT CAGCGACCGC CGAGGCTACC AACCGCATCG TTGCCGGCGG CGTCAACTAT
TCCATTGCAC CCGCCATCGA TCTCCTGGCC GGGTACTACA AGGTGGATCG CCGCCGCACT
GCGCAGCCCG ACGACGGCTT CAAGCGCTTG CTCGCCTTCG TCGAGTACAA GCTCTCGCGA
CGCAGCAAGG TGTACCTGGA GCTGGATACA ACGCGCTGGA AGGGCAATTA CCTGGGGGCG
GGTAACAAGT CGACGTCCAA TGGCGTCAGT CTGGGCATTA CGCACGCGTT CTAA
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| Protein sequence | MTKRQILAAA AVSLAMPVMA QTASSVTLYG ILNVAVRSQT GLTSTYGRSP VDTTVVASGV
GPTSRWGLRG TEDLGGGLRA TFNLESGINV DTGTQANAVT YFDRASTVGL AGAWGTTTVG
RQNTLLADSA GVADPIGLRF AGLNPNIQNV SLTGHQLGVE YGTTGSSTAS NRQNNSIKYS
VPIGPVVARA MHSFGEVAQS SSRKSTSGLG VDYLTEELKI TTAYTRFKDA NDRRLTAANV
GASWLALPSL RVMANMGYNR GFTSATAEAT NRIVAGGVNY SIAPAIDLLA GYYKVDRRRT
AQPDDGFKRL LAFVEYKLSR RSKVYLELDT TRWKGNYLGA GNKSTSNGVS LGITHAF
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