Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4308 |
Symbol | |
ID | 4013032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4541280 |
End bp | 4541723 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943960 |
Product | hypothetical protein |
Protein accession | YP_551098 |
Protein GI | 91790146 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00896563 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAC GCATTCTTGT CGCAACCGAT GGTTCCCCCC TCTCGAAAAA GGCCGTCCGC AGCGCGATCG GGCTGGCCAC CGCGCTTGAC GCCGAGCTCG TGGCGCTCAA TGTCGTGCCA CGCTATCCCA TGAGCTATTT CGAGGGCAAC GTGTCGATCT CGCTCCAGGA GGTCGGCCGC ATCGAGAAGC AATGGGCCAC CGAGGGCCAG GCCATGGTTG ATGCGGTGCA GCAGGCCGCG CAGGCCGAAG GGCTCCGGGC CAAGGCCGTC GTCACGCGCT CCAACCTGGT GGCCGAGGCC ATCATGGCCG CCGCCAGAAA ACACAAGTGC GACCTGATCG TCATGGCCTC GCACGGCCGC AAGGGCATCA AGCGCGTGCT GCTGGGCAGC GAAACGCAGC ATGTACTGGC GCACAGCACC ACGCCCGTGT TAGTGTTGCG TTGA
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Protein sequence | MYQRILVATD GSPLSKKAVR SAIGLATALD AELVALNVVP RYPMSYFEGN VSISLQEVGR IEKQWATEGQ AMVDAVQQAA QAEGLRAKAV VTRSNLVAEA IMAAARKHKC DLIVMASHGR KGIKRVLLGS ETQHVLAHST TPVLVLR
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