| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4298 |
|---|
| Symbol | |
|---|
| ID | 4013022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4532921 |
|---|
| End bp | 4533388 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637943950 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551088 |
|---|
| Protein GI | 91790136 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.248208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAC GCATTCTCGT GCCCGTCGAC GGTAGCGAAA CCTCCAACAA GGCCCTGGTC
ACCGCATTGC AGTTCGCCAG GGACTTCGGC GGCCGGGTGC GGCTGGTCCA TGTGGTGGAA
GATCTGACCT ACGTCACCGG CAACGACCCC TCTGGCTACT CGGGGGAACT GGCCACCGTC
ATGCGCGAAG CCGGCGAAAA GATCCTGGCC GGCGCCCTGG CCATTGCCCA ATCGGCCGGC
GTGGAAGCCG ACTCCATGCT GTTCGACAAA CCCGGCGAGC GGCTGGCGGA GACCGTGGCC
GATGCGGCCA AGCGCTGGAA CGCAGACCTG ATCGTCGCAG GCACCCACGG CCGGCGCGGC
CTGGGCCGCG TGCTCATGGG CAGCGGCGCG GAGCAGATTG TCCGCCTGGC ACCGGTGCCC
GTGCTGGTGG TGCGGCTACC TGAGAGCAGC CCGCCGTCAC CCGCCTGA
|
|---|
| Protein sequence | MYKRILVPVD GSETSNKALV TALQFARDFG GRVRLVHVVE DLTYVTGNDP SGYSGELATV
MREAGEKILA GALAIAQSAG VEADSMLFDK PGERLAETVA DAAKRWNADL IVAGTHGRRG
LGRVLMGSGA EQIVRLAPVP VLVVRLPESS PPSPA
|
|---|
| |