| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4297 |
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| Symbol | |
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| ID | 4013021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4531513 |
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| End bp | 4532556 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943949 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_551087 |
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| Protein GI | 91790135 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.330978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA CCGCCGCCCG GCTGGCGGGC CTGCTCGACT CGGCCATGGA CGCCATCATT
ACGGTGGACG AAGAACAGCG CATCGTGCTG TACAACCGTG CGGCTGAGAG AATCTTCGGC
TGGCCGAGCG CACAGGCGAT GGGGGAACAC CTGGAAAAGC TGATGCCGGA GCGCTTTCGC
ACCAGCCATG CCGGGCATAT CCGCCGTTTT ACCGCCACGG GCATCACGTC GAGGCGCATG
GGCGACGGCA CCGTGCTTTA CGGGCAGCGC GCCAACGGTG AAGAATTCCC GATGGAGGCC
TCCATCTCCC AACTGGACAC GGCGGACGGC AAGCTGTTCA CCGTGATCCT GCGCGATGTC
AGCGAACGGG TGCGCGCCCA GGAAGAACTG AGCGCCTTCG CCGCTGCGGC CCACACCATT
CGCGAAGGCG AGAAGACCCG CATTGCGCGG GAACTGCACG ACGAGCTGGC CCAGTCGCTC
ACAGCCCTCA AGATGGACGC GATCTGGGTG CGCGACCAGC TGCCAGAGGG AGCGCAGGCG
GCCGCAGCCA AGCTCGGTGA CATGCTGGCT ATGCTGGACA CCACGGTCGC CGCCACCCGC
CGCATCGCCT CGGACCTGCG CCCGCTGTTG CTGGACGACC TGGGCCTGGG GCCGGCTATC
GAATGGCTGG CTCAAAATTT CAGCCAGCGC TCCGGCGTGG CCTGCACGCT CTCGGTGGAT
GACGAGGTGG AACTGCACGA GCCTTATGCC ACCGCGGTGT TCCGCATCGT GCAGGAGTCG
CTGGCCAATG TGGCCAAGCA TGCCGAAGCC TCGCGTGTCG AAGTAAAAAT CGAGCGGACG
GTGGAGGCGG TCACCCTGCG TGTCGCCGAT AACGGCCGGG GTTTTTCGCT GGCCGCACCG
CGCAACCCCA ACTCCCTGGG ACTTCTGGGC TTGCGCGAGC GCGCACAGTT GCTCAAGGGG
GCGGTCACCA TTGACAGCCA GCCGGGGCAG GGAACCCGTA TTGATGTGCG GATCCCGATA
CGGGAAGTGG GAGCTGCGGA TTGA
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| Protein sequence | MDATAARLAG LLDSAMDAII TVDEEQRIVL YNRAAERIFG WPSAQAMGEH LEKLMPERFR
TSHAGHIRRF TATGITSRRM GDGTVLYGQR ANGEEFPMEA SISQLDTADG KLFTVILRDV
SERVRAQEEL SAFAAAAHTI REGEKTRIAR ELHDELAQSL TALKMDAIWV RDQLPEGAQA
AAAKLGDMLA MLDTTVAATR RIASDLRPLL LDDLGLGPAI EWLAQNFSQR SGVACTLSVD
DEVELHEPYA TAVFRIVQES LANVAKHAEA SRVEVKIERT VEAVTLRVAD NGRGFSLAAP
RNPNSLGLLG LRERAQLLKG AVTIDSQPGQ GTRIDVRIPI REVGAAD
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