| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4296 |
|---|
| Symbol | |
|---|
| ID | 4013020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4530872 |
|---|
| End bp | 4531516 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943948 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_551086 |
|---|
| Protein GI | 91790134 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.891496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCAGGA TCGTCATTGT GGATGACCAC GCCATTGTGC GGGAAGGTCT CAAACGCATC
ATTTCCTCGG CCGACGACAT GGAGGTGGCG GGCGAAGCCG CCAATGGCGC CGAGGCCATG
CAGCGCGTGC GCGAACTGGC CTTCGACGTA CTGATGCTGG ACCTGTCCAT GCCGGGGCGC
AGCGGCATGG AGTTGATCAA GCTGGTCCGT GCTGAGAAGC CCAAGCTGCG CATCCTGGTG
CTGAGCATGC ACCAGGAGCT GCAGTACGCC GTGCGCGCCA TCAAGTCCGG CGCCAGTGGC
TACCTGACCA AGGAGAGCGC GCCGGCGCAG CTGGAGCAGG CCATCCGCAA GATCGCCGCC
GGCGGTGCTT TCATCAGTGC CGAAGTCGCC GAGCAGCTGG CCCTGGGTGC CATGCCGGGC
AGCGAGGTCG CCGCGCACGG AAGCCTGTCG GACCGTGAAT TCGAAGTGTT CCGCCTGCTG
GTCGCGGGGG TGTCGGTGAC CGAGATTGCG GGTCGGCTCA ACCTGTCGGT CAAGACCGTC
AGCACGCACA AGGCCAACCT GATGCACAAG ATGGGCCTGC ATAACCAAAG CGAGTTGATC
CGCTACGCGA TGCGGCACGG CCTGACCGAC CAGTTCGAGC CCTAG
|
|---|
| Protein sequence | MIRIVIVDDH AIVREGLKRI ISSADDMEVA GEAANGAEAM QRVRELAFDV LMLDLSMPGR
SGMELIKLVR AEKPKLRILV LSMHQELQYA VRAIKSGASG YLTKESAPAQ LEQAIRKIAA
GGAFISAEVA EQLALGAMPG SEVAAHGSLS DREFEVFRLL VAGVSVTEIA GRLNLSVKTV
STHKANLMHK MGLHNQSELI RYAMRHGLTD QFEP
|
|---|
| |