Gene Bpro_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4161 
Symbol 
ID4013177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4376740 
End bp4378473 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content65% 
IMG OID637943808 
ProductAMP-binding domain protein 
Protein accessionYP_550951 
Protein GI91789999 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA CCCCCTCGGC CCCAACCGGC CTGAGCCTGG CGTGCGGCGC CACCGAGGTG 
CCGCTGATAG CGCAGACCCT GGGCGACTTT TTTGATGCCA TGGTGGAGCG CCAGCCCGGA
GCCGAGGCCC TGGTCAGCGT TCACCAGAAG CTGCGCTATA CCTATCGCGA ACTGCAAACC
GAGGCCAACC GGCTGGCCAG CGCGTTGCTC GGGCTGGGTC TGCTGTCCGG CGACCGCGTG
GGCATCTGGT CGCACAACAA TGCACAGTGG GTGCTGATGC AGCTGGCCAC GGCCAAGGTC
GGGCTGATCC TGGTCAACAT CAATCCCGCC TACCGTGTGG CCGAGCTCGA GTACGCGCTC
AACAAGGTGG GCTGCAAGGC GCTGGTCACC ATGGCGCGCT TCAAGACCAG CGACTACCTC
GGCATGCTGC GCGAGCTGGC GCCGGAATGG GCGCACGCGC AGCCGGGCCG GCTGGAGTCG
GCCAGGCTGC CCCATTTGCA CACCGTGGCC TGGATCGACG AGCCGGGGCA GGGCGCCGAG
CTGGACGAGG ACTTGCCCGG CCTGCTGCGC TTTTCCGCGC TGCTGGCCAG CGGCCAGCCG
CAGGACCCGC GGCTGGCCGA GGTGGCCCGC ACGCTCAAGG CTGGCGACCC GATCAACATC
CAGTTCACCA GCGGCACCAC GGGGTTCCCG AAGGGCGCGA CACTGACGCA CCGCAACATC
CTGAACAACG GCTTTTTCAT CGGCGAGGCC ATGAAGCTCA CGCCGGCCGA CCGCCTGTGC
ATTCCGGTTC CGCTGTACCA CTGCTTCGGC ATGGTGCTGG GCAACCTGGC CTGCCTTACG
CATGGCGCGA CCATCGTCTA CCCGAACGAC GGTTTCGACC CGCTGAGCGT GCTGCAAACC
GTGCAGGACG AGAAATGCAC GGGCCTGCAC GGCGTGCCCA CCATGTTCAT CGCCGAGCTC
GACCATCCGC GCTTCAAGGA GTTCGATCTG TCCACGCTGC GCACCGGCAT CATGGCCGGC
TCGCCCTGCC CGATCGAGGT CATGAAGCGC GTGGTCGGTG AGATGCACCT GTCTGAAATC
ACGATCGCCT ACGGCATGAC CGAAACCAGC CCGGTCAGCT GCCAGAGCTC GACCGACACG
CCACTGGAAA AGCGCGTGGC CACCGTGGGC CTGGTGCAGC CGCACCTGGA AGTCAAGATC
GTCGACCCCG AAAGCGGCGA GATCGTCGCG CCGGGCGTCT CGGGCGAGCT GTGCACGCGC
GGCTATTCGG TCATGCACGG CTACTGGGAG GACGAGGCCA GGACGGCTGA GGCCATCGAT
GCCGAAGGCT GGATGCACAC CGGCGACCTG GCCACCATGG ATGCCGAAGG CTATGTCAAT
ATCGTCGGCC GCATCAAGGA CATGGTGATA CGCGGCGGCG AGAACATCTA CCCGCGCGAG
ATCGAGGAAT TCCTCTACCG CCACCCCAAG GTGCAGGACG TGCAGGTGGT GGGCGTGCCC
GACCCGAAAT ACGGCGAGGA GCTCTGCGCC TGGATCATCG TCAAGCCCGG CCAGTCTGTG
AATGAGGAAG AGATTCGCGC CTTTTGCAAG GGCCAGATTG CGCACTACAA GGTACCGCGC
TACATTCGTT TTGTGTCGGG CTTTCCCATG ACGGTGACCG GCAAAATCCA GAAGTTCAAG
ATTCGCGACG AAATGAAGCA CCAGCTGGGG CTGGAAGAAG ACAAAACCGC TTGA
 
Protein sequence
MTQTPSAPTG LSLACGATEV PLIAQTLGDF FDAMVERQPG AEALVSVHQK LRYTYRELQT 
EANRLASALL GLGLLSGDRV GIWSHNNAQW VLMQLATAKV GLILVNINPA YRVAELEYAL
NKVGCKALVT MARFKTSDYL GMLRELAPEW AHAQPGRLES ARLPHLHTVA WIDEPGQGAE
LDEDLPGLLR FSALLASGQP QDPRLAEVAR TLKAGDPINI QFTSGTTGFP KGATLTHRNI
LNNGFFIGEA MKLTPADRLC IPVPLYHCFG MVLGNLACLT HGATIVYPND GFDPLSVLQT
VQDEKCTGLH GVPTMFIAEL DHPRFKEFDL STLRTGIMAG SPCPIEVMKR VVGEMHLSEI
TIAYGMTETS PVSCQSSTDT PLEKRVATVG LVQPHLEVKI VDPESGEIVA PGVSGELCTR
GYSVMHGYWE DEARTAEAID AEGWMHTGDL ATMDAEGYVN IVGRIKDMVI RGGENIYPRE
IEEFLYRHPK VQDVQVVGVP DPKYGEELCA WIIVKPGQSV NEEEIRAFCK GQIAHYKVPR
YIRFVSGFPM TVTGKIQKFK IRDEMKHQLG LEEDKTA