| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4144 |
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| Symbol | |
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| ID | 4013199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4356922 |
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| End bp | 4359039 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943791 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_550934 |
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| Protein GI | 91789982 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.269765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.051822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATGT TTGGCGCCGC AAATCAGTCG CAGAGCGACT TCAAGAAAGG CCTGCACAAG
GTCTACGGGT GGTACACGGG AGGCTTCATC GGTTTTGTGA TCGTGCTGGC GATCCTGGAG
CAGCTGGGGC TACCGAAGAA CTGGATCGGT TACCTGTTCC TGGCCGCGAC GGTGCTGCTG
TATGCGGGCA TCGGGGTCAT GAGCCGCACC AGCGATGCGG CCGAATACTA CGTGGCCGGG
CGTCGCGTGC CCGCCATGTA CAACGGCATG GCCACCGGGG CGGACTGGAT GTCGGCGGCC
TCCTTCATTG GCATGGCCGG CACGCTGTAC CTGACCGGTT ACGGGGGGCT GGCCTTTATT
CTGGGCTGGA CCGGCGGCTA CTGCCTGGTG GCGCTTTTTC TGGCGCCTTA CCTGCGCAAG
TTTGGCCAGT TCACCATTCC AGACTTTTTG GGCGCACGCT ATGAGGGCAA CCTGCCGCGC
CTGATTGGTG TGTTCGCCGC CATTCTGTGC TCCTTCACCT ACGTGGTGGC GCAGATCTAT
GGCGTGGGCC TGATCACTGC GCGTCTGACC GGACTGGCAT TCGAGATCGG TATCTTTGCC
GGTCTGGGCG GCATTCTGGT GTGCTCGTTC CTCGGCGGCA TGCGTGCCGT GACCTGGACC
CAGGTGGCGC AGTACGTGAT TCTCATCATT GCCTACCTGC TGCCGGTGAT CTGGCTGTCG
GTCAAGCACA CCGGCGTGCC GGTTCCGCAG GCGGTCTATG GCTACACGCT TCAGAAGGTG
ACAGCCAAGG AAGAACAGTT GCTGAAGGAC CCGAAAGAGC TCGAAGTACG TGATCTCTTC
AAGGCGCGTT CGGAAGCGGC TGTTGCCAAA CTGAAGGACG TTCCCGCTGC CATGGCTGCC
GACAAGGCCG CCGCGCAGAA GAGGCTGGAC GACCTGAAAG CTGCGAACGG CGCTGTGGCC
GACATCCGGG CCGCTGAGGC AGCCTTGGCA GGACTGCCCA AGGATGAGGC TGCGGCCAGG
GCTGCCTACA CTGCCGCGCG TGTCGGGAAC GCCGCACGGT CTGCGCCACC GATTCGTCAT
GCCCAACCCT TCCCGGGCAA GGATGAAGCT GCGCAGGATA TTTCGCGCAA AAACTTCCTG
GCGCTGGTGT TCTGCCTGAT GATCGGTACC GCCGCACTGC CGCACATCCT GATGCGTTAC
TACACCGTGC CTTCGGTGAA GGAAGCGCGT CAGTCGGTGA GCTGGTCGCT GTTCTTCATC
TTCCTGCTCT ACTTCACGGC GCCGGCGCTG GCGGTGATGG CCAAATATGA GGTGTACACC
GTGCTGGTGA ACACGCCGTT TGACAGTTTG CCAGGCTGGA TCGCGCGCTG GAACGCCGTC
GACCCGACCT TGTTGTCGGT GGTGGACATC AACAAGGACG GCATCCTGCA GCTGGCCGAA
ATCAGCATTG GTGGCGACAT CATTGTGTTG GCCACGCCTG AGATTGGCGG GCTGCCCTAC
GTGGTGTCGG GCATGGTGGC TGCGGGTGGT CTGGCGGCTG CGCTGTCTAC CGCGGATGGT
TTGCTGCTGA CGATTGCCAA CGCGCTGTCG CATGATCTGT ACTACAAGGT GCTGGATCCG
AATGCGTCTA CCGCACGCCG TGTGATGGTG TCCAAGGTGC TGTTGCTGGT TGTTGCCTTG
TGTGCGGCCT ATGTGGCGGC CCAGAAGCCA GCGGACATCC TGTTCCTGGT GTCGGCTGCG
TTCTCGTTCG CCGCGGCGGC ATTCTTCCCT GCGCTGACTC TGGGCATCTT CTGGAAGCGC
GCCAACAAGT GGGGTGCCTC GCTGGGCATG ATCGCAGGCT TGGGCACCAC CTTCTACTAC
ATGATGACCA CCCAGCCATG GCTCTACAAG CTGACCCACA GCGGAGCCGC CATCACGCCT
GAAATCCTCA AGGCCAATAC ATGGTGGGAT ATTGCCCCGA TCTCGGCCGG CCTGTTTGGT
GTGCCGCTGG GCTTTGCAGT AATCATCGTT GTGTCGCTGC TGACCAAGGC CCCGGGCAAG
GACGTTCAGG AGCTGGTGGA GCATGTGCGT TACCCCAGCC TGGATGGCAA GGTTGCCGCT
GCCGGTGCCG GCCACTGA
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| Protein sequence | MGMFGAANQS QSDFKKGLHK VYGWYTGGFI GFVIVLAILE QLGLPKNWIG YLFLAATVLL
YAGIGVMSRT SDAAEYYVAG RRVPAMYNGM ATGADWMSAA SFIGMAGTLY LTGYGGLAFI
LGWTGGYCLV ALFLAPYLRK FGQFTIPDFL GARYEGNLPR LIGVFAAILC SFTYVVAQIY
GVGLITARLT GLAFEIGIFA GLGGILVCSF LGGMRAVTWT QVAQYVILII AYLLPVIWLS
VKHTGVPVPQ AVYGYTLQKV TAKEEQLLKD PKELEVRDLF KARSEAAVAK LKDVPAAMAA
DKAAAQKRLD DLKAANGAVA DIRAAEAALA GLPKDEAAAR AAYTAARVGN AARSAPPIRH
AQPFPGKDEA AQDISRKNFL ALVFCLMIGT AALPHILMRY YTVPSVKEAR QSVSWSLFFI
FLLYFTAPAL AVMAKYEVYT VLVNTPFDSL PGWIARWNAV DPTLLSVVDI NKDGILQLAE
ISIGGDIIVL ATPEIGGLPY VVSGMVAAGG LAAALSTADG LLLTIANALS HDLYYKVLDP
NASTARRVMV SKVLLLVVAL CAAYVAAQKP ADILFLVSAA FSFAAAAFFP ALTLGIFWKR
ANKWGASLGM IAGLGTTFYY MMTTQPWLYK LTHSGAAITP EILKANTWWD IAPISAGLFG
VPLGFAVIIV VSLLTKAPGK DVQELVEHVR YPSLDGKVAA AGAGH
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