| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4140 |
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| Symbol | |
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| ID | 4013195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4352091 |
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| End bp | 4353203 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637943787 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_550930 |
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| Protein GI | 91789978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.544868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGAATTTATG GTGCGGCGCC ATCGTGCTGA TGGCCTTGGG TCACGCCAGC
CAGGCGCAAA TCCTGATCGG ACAGACCGCC GGGTTTACCG GCGCGGTGGG CGCAGGTGTC
AAGGAAACCA CAGAAGGCGC CAAGCTTTAC ATTGACACCA TCAACGCCAA GGGCGGTGTC
AACGGCCAGA AGATTGAGCT GGTCTCGCTC GACGACAAGT TCGACCCCAA GCTGGCGGCC
GAAAACGCGC GCAAGCTGAT AGAAGAGCAG AACGTGGTGG CAATGTTCCT GACGCGCGGC
ACGCCCCACA CGGAAGGCAT CATTCCCATC CTTGAAAAAA ATGGCGTGCC GCTGATAGGC
CCGTCCACCG GTGCCATGGT GCTGCACCAG CCCGTCAAGA AGCATGTCTT CAATGTGCGC
GCCACCTACC AGCGCGAAGC CGAAAAGGCC ATCACCCATC TGCATTCCAT GGGCATCACG
CGGATCGGCA TTGTCTACGC GGACGACAGC TTCGGCGCCG ATGGCGTGGC CGGCGCGCAA
AAAGGCCTGA CGACGGCCAA GCTGCAGCCC GTTGTGCTGG AAAAATTCAA CCGCGCCAAG
CCCGACTTCG GGCCGATTGC TCCCAAGGTT TTTCAGTCCA ATGCGCAGGC CATCATGATG
GTGGCCTCCG GCCAGGCGGT GGTGGATGGC GTCAAGGCCT TCCGCGCGGC GGGCTCTGCG
GCACAGATTG TGACGCTGTC CAACAATGCC TCCAGCGGTT TTGTGAAGAG CCTGGGCGAG
AACGCGCGGG GCGTGATCGT CACGCAGGTC TTTCCCTACG AGCGCTCCAT TGCCTTCCCC
ATGGTCAGGG AAGCCCAGGA AATGGCCAAG GCGAAGGGAC AGGGCGAAAT CACTCCGGCC
ATGCTGGAGG GCTTTGCCGC GGCCAAGGTG CTGGTGGAAG GCCTGCGCCG GGCCGGCGCC
AAACCCACCC GCGAAAAAAT CCAGGCAGCC CTGGAAGGTC TTCGCAAACT GGATATTGGC
GGACTGGAAG TGAACTACAG CGCAGAGGAC CACACCGGGC TTGATTTCGC CGATCTGTCC
ATCATCGGGA CCGACGGGAA ATTCAAGCGC TGA
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| Protein sequence | MKKLNLWCGA IVLMALGHAS QAQILIGQTA GFTGAVGAGV KETTEGAKLY IDTINAKGGV
NGQKIELVSL DDKFDPKLAA ENARKLIEEQ NVVAMFLTRG TPHTEGIIPI LEKNGVPLIG
PSTGAMVLHQ PVKKHVFNVR ATYQREAEKA ITHLHSMGIT RIGIVYADDS FGADGVAGAQ
KGLTTAKLQP VVLEKFNRAK PDFGPIAPKV FQSNAQAIMM VASGQAVVDG VKAFRAAGSA
AQIVTLSNNA SSGFVKSLGE NARGVIVTQV FPYERSIAFP MVREAQEMAK AKGQGEITPA
MLEGFAAAKV LVEGLRRAGA KPTREKIQAA LEGLRKLDIG GLEVNYSAED HTGLDFADLS
IIGTDGKFKR
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