| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4060 |
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| Symbol | |
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| ID | 4013271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4267526 |
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| End bp | 4268680 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943708 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_550851 |
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| Protein GI | 91789899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.255859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATGA TGTCGCGAGT GGTCCGGTGG AACTGGGTGA TGTTTGTCCT GGCCCTGGCC
GCCGTGTTGC CTGTCCGCGC CGAGCCTGGC GTGAGCGACA CGGCCATTGC GGTCGGGCAA
TCGGCGGTAT TTAGCGGGCC GGTTGCCGCG ACCGGGAACA ACTACCGGCG CGGTATCGAA
CTCTACTTCG AGCAGGCGAA CAAGGCCGGT GGCGTGCACG GGCGCAAACT GCAGCTGACA
GCGCTGGACG ACGCCTACGA TCCCAAACGC ACGGTCGAAA ACACCAAGCT TCTCATCGAG
CAAAACAAGG TGTTTGCGCT GATCGGCTAT GTGGCCACGG CCAATTTGAT TGCGGCCATG
CCGCTCGCCG AGGAGGCCAA GGTTCCGATG TTCGCGCCCC TGGTGGGCAC GACTTCCATC
CGGCTCAAGC ACAACCACTA TCTTTTTCAC GTGAGGGCGA GCTACAAAAC CGAACTGGCC
CGGATTACCC AGCAGCTGGC AGTGGTCGGC AACGACAAGG TGGCCGTGGT TTACCAGGAC
AGCGTTTTCG GCAAGTCCAA CCTGGACACC CTGCTCGAGC TCATCAAGGC CGAGAAGCTA
CAGGTCGTCA AAACAATTCC CATGGCCATT GCCGCGACGA GTGCCGCCGA CATTGCAGCG
CAGATCAAGG AAGCGTCGCC CAACGTCATC ATCATGATCA TGGCCGGCAC AATGACGGAA
GTGCTGATCA GGGATGTGCG TGCCGCCGGT TTGGGCGCAC CGCTTTACAC CATCTCGGTT
GGCCTGGCGG ACGCCAAGGC CTCGGCCGCC CGCTTGAACG GCGCCTTGCG CGGCGTCATC
ACGGCCAGCA TCGTCCCGTC GCCGACACTG GAGCGTTACG GCGTCGTCAA GGAGTACCGC
AAGGCGCTGG GCACGTCGGC GGGGTCGGGC GACAACTACA CCGTGCTTGA AGGTTATATT
GCGGCCAAGG CTTTCGTCGA AGGGCTGCGC CGCGCGGGGC GCGCTCTGAC CCGGGAACAC
TTTATAGCGG CGCTGGAAGG ATTCGGCAAT CTGGATCTGG GCGACTTCCG GGTCGACTAC
AGCCCGAAAA ACCACAACGG CTCCAGCTTC GTGGAGCTTG AGATGTACAC CGCAGCAGGC
ACTTTGATTC GATGA
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| Protein sequence | MNMMSRVVRW NWVMFVLALA AVLPVRAEPG VSDTAIAVGQ SAVFSGPVAA TGNNYRRGIE
LYFEQANKAG GVHGRKLQLT ALDDAYDPKR TVENTKLLIE QNKVFALIGY VATANLIAAM
PLAEEAKVPM FAPLVGTTSI RLKHNHYLFH VRASYKTELA RITQQLAVVG NDKVAVVYQD
SVFGKSNLDT LLELIKAEKL QVVKTIPMAI AATSAADIAA QIKEASPNVI IMIMAGTMTE
VLIRDVRAAG LGAPLYTISV GLADAKASAA RLNGALRGVI TASIVPSPTL ERYGVVKEYR
KALGTSAGSG DNYTVLEGYI AAKAFVEGLR RAGRALTREH FIAALEGFGN LDLGDFRVDY
SPKNHNGSSF VELEMYTAAG TLIR
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