Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4036 |
Symbol | |
ID | 4013286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4237096 |
End bp | 4238397 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637943685 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_550828 |
Protein GI | 91789876 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.615075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.406795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGGC CGCGCGCCAC AAACAGTAAT GGACGCGAAG GGGCCGCAAC CGCACACTAC GCGGCCATGG ACACCACTAC ATCTGTCAAT CGCGGCCCGC TGGCTGGCCT CAAGGTTCTT GAACTCGGGC AACTGATCGC CGGGCCGTTT GCCGCCAAAA CGCTGGCCGA CTTTGGCGCC GACGTCGTCA AGATCGAACC GCCCGGCGCG GGCGACCCGC TGCGTAAATG GCGGCTGCTC AAGGATGGCA CCTCGGTCTG GTGGCAGGTG CAGTCGCGCA ACAAGCGCTC GCTGGCACTC GACCTGAAAG ACCCGCAAGC CCAGGACATC GTGCGCAAAC TGGCACGGGA CGCCGACGTG CTGATCGAGA ACTTCCGGCC CGGCGCCATG GAAGGCTGGG GCCTGGGGCC CGACGAACTG CTCAAGCTCA ACCCGCGCCT GATCATGCTG CGCATCAGCG GCTACGGCCA GACCGGCCCC TACCGCGACC GCCCCGGCTT TGGCGTGGTG GCCGAAGCGA TGAGCGGCTT GCGCCACCTG ACGGCCGAGC CGGGCCGCGT GCCGGTGCGC GTCGGCGTGA GCATTGGCGA CACGCTGGCC GCGCTGCATG GCGTGATCGG CATCCTGCTG GCGCTGCACC ATCGCACGGC CCACGGCGTC GGCCAGGTGA TCGACGTGGC GCTGTATGAA GCGGTGTTCA ATTGCATGGA AAGCCTGCTG CCCGAATACA GCGCGTTTGG CGCCGTGCGC GGCCCGGCCG GCAGCGCCCT GCCCGGCATT GCGCCGAGCA ATGCCTACCG CTGCAAAGAC GACGGTTACG CCCTCATTGC GGGCAATGGC GACAGCATTT TCAAACGGCT GATGGCCGTG ATCGGCCGCG ACGACCTGGG AGCCGACCCT CTGCTTTCCG ACAACGCCGG CCGGGTAGCA CGCGTCGCCG AAATCGACGA AGCCATCGGC CAATGGGCCG CGCAGCGCAC GGTCGATGAG GTGCTGGCGG CGCTCGACAA GGCCTCGGTG CCGGCAGGCC GCATCTACAC GGTGGCTGAC ATTGCCGCCG ACCCGCACTA CCAGGCGCGC GGCATGCTGG ACAGCGTGCA GATGGCCGAC GGCAGCACGC TGGCCGTGCC CGGCATCACG CCCAAGCTGT CGCTCACACC CGGCGGTCAC CGGCGCAACG CGCCCGTGCT GGGCCAGGAC ACCGACGCCG TGCTGCATGA ACTCGGCCTC ACGCCTGAAC AGATTCAGGG CCTCAAGGAC AAAGGTATCG TTTCATGCAC TGCTACAGGA GCCCAATCAT GA
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Protein sequence | MRRPRATNSN GREGAATAHY AAMDTTTSVN RGPLAGLKVL ELGQLIAGPF AAKTLADFGA DVVKIEPPGA GDPLRKWRLL KDGTSVWWQV QSRNKRSLAL DLKDPQAQDI VRKLARDADV LIENFRPGAM EGWGLGPDEL LKLNPRLIML RISGYGQTGP YRDRPGFGVV AEAMSGLRHL TAEPGRVPVR VGVSIGDTLA ALHGVIGILL ALHHRTAHGV GQVIDVALYE AVFNCMESLL PEYSAFGAVR GPAGSALPGI APSNAYRCKD DGYALIAGNG DSIFKRLMAV IGRDDLGADP LLSDNAGRVA RVAEIDEAIG QWAAQRTVDE VLAALDKASV PAGRIYTVAD IAADPHYQAR GMLDSVQMAD GSTLAVPGIT PKLSLTPGGH RRNAPVLGQD TDAVLHELGL TPEQIQGLKD KGIVSCTATG AQS
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