Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4023 |
Symbol | |
ID | 4013312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4221391 |
End bp | 4223406 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637943672 |
Product | short chain dehydrogenase |
Protein accession | YP_550815 |
Protein GI | 91789863 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.367232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.629555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTATT TCGTCACGGG AGCCACCGGC TTCATTGGTA AACGGCTGGT TAAAAAACTC CTGGAGCGAA AAGGCAGCAC CGTTCATTTC CTGATCCGCC AGGAAAGCGC CGGCAAATTG GCGGCGCTCA GGGCGTACTG GGGCGTGAGT GCCGGCAGGG CGGTTGCCGT GCATGGTGAC CTGACCCGCA AAAAGCTCGG TGTCAGCAGC GAGGACATCA AAAAACTCAA GGGGCAGGTG AGCCATTTTT ATCACCTGGC AGCGGTGTAC GACCTGGGCG CCGACGAGGA AAGCCAGATC GCCGTCAACA TTGACGGCAC ACGCAACACC GTCGAGTTTG CCAAGGCGAT TGATGCAGGC CACTTTCATC ACGTGAGCTC CATCGCCGCG GCAGGCCTGT ATGAAGGCGT GTTCCGCGAA GACATGTTCG AGGAGGCTGA GAACTACGAA CACCCGTATT TCATGACCAA GCACGAGAGC GAAAAAATCG TGCGCGCCGA GTGCAAGGTG CCGTGGACGG TGTTTCGGCC GGCCATGGTG GTGGGCGACA GCACCACCGG CGAAATGGAC AAGATTGACG GCCCTTACTA CTTCTTCAAG CTGATCCAGC GCATGCGGCA ACTGCTGCCG CCCTGGATGC CGGCCGTGGG GCTGGAAGGC GGGCGCATCA ACATTGTTCC GGTCGACTTC GTGGTCGATG CGCTGGACCA CATCAGCCAC CTCCCCAAAG ACAGGGGCGA CATTGCCAAA AAATGCTTCC ATCTGGTGGA CCCGGTGGGT TACCGCGTCG GCGATGTGCT CGACATCTTC AGCCGGGCGG CCCACGCACC GAAGATGAAC CTGTTTGTCA ATGCGGCCCT GCTGGGCTTC ATTCCGCGCG GCGTCAAGAA AAGCCTGATG GCGCTTGCGC CGGTGCGCCG CGTGCGCGCC GCCGTCATGG CCGACCTCGG CCTGCCAGAG GACATGCTGA CCTTCGTGAA CTACCCCACC CGGTTTGATT GCCGGGGCGC GGCCACTGCG CTCAAGGGAT CCGGCATTGA ATGCCCCAAC CTCAAGGACT ACGCATGGCG CCTGTGGGAT TACTGGGAGC GCCACCTCGA CCCCGACCTG CACATTGACC GCACGCTCAA GGGCACGGTC GGCGGCAAGG TGGTGCTGAT TACCGGCGGC TCTTCAGGCA TTGGCCTGGC GGCAGCGCAC AAATTTGCCG AGGCCGGCGC CATCACCGTC ATCTGCGGCC GCGACCAGGA CAAGCTCGAC GAGGCCTGCA AAGAGGCGAA AGCCAAAGGC TACAACTTTG TTGCTTACCC GGCCGATATC GCCGACATGG CAGACTGCGA CCGCTTCCTC AAGGAACTGA TCGCCAACCA CGGCGGCGTC GACTTCCTGA TCAACAACGC CGGACGCTCG ATTCGCCGCG CCATTGAGGC CAGTTACGAC CGTTTCCATG ATTTCGAGCG CACCATGCAG CTCAATTACT TTGGCTGCCT GCGCGTGACC ATGGGCCTGC TGCCCGGCAT GGCGGCCAGG CGCAAGGGCC ACGTGGTCAA CATCAGCTCC ATCGGCGTGC TGACCAATGC GCCACGCTTT TCGGCCTACG TGGCCTCCAA GGCCGCGCTG GACGCCTGGA CGCGCTGTGC CTCCAGCGAG TATGCCGACC TCGGCATCGG CTTTACCACC ATCAGCATGC CGCTGGTGCG CACGCCCATG ATTGCGCCCA CCAACCTCTA CAACAACGTA CCCACCCTTT CGCCCGAAGA GGCCGCCGAC ATGATTGCAC AGGCCTGCAT CTTCAAGCCG GTGCGCATTG CCACCCGCCT GGGCATTGCC GGCCAGGTGC TGCATGCCCT GGTGCCGCGC ATCGCCCAGA TTGCCATGAA CACCAGCTTC CGCATGTTTC CTGACTCATC GGCCGCCAAA GGTGAGAAGG GCGGGAAGGG TGAAAAGAGC GCCAGGCCGC AGCTGTCGGC CGAGGCGGTG GCCATGCAGC AGATGATGCA GGGGATTCAT TTCTAA
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Protein sequence | MHYFVTGATG FIGKRLVKKL LERKGSTVHF LIRQESAGKL AALRAYWGVS AGRAVAVHGD LTRKKLGVSS EDIKKLKGQV SHFYHLAAVY DLGADEESQI AVNIDGTRNT VEFAKAIDAG HFHHVSSIAA AGLYEGVFRE DMFEEAENYE HPYFMTKHES EKIVRAECKV PWTVFRPAMV VGDSTTGEMD KIDGPYYFFK LIQRMRQLLP PWMPAVGLEG GRINIVPVDF VVDALDHISH LPKDRGDIAK KCFHLVDPVG YRVGDVLDIF SRAAHAPKMN LFVNAALLGF IPRGVKKSLM ALAPVRRVRA AVMADLGLPE DMLTFVNYPT RFDCRGAATA LKGSGIECPN LKDYAWRLWD YWERHLDPDL HIDRTLKGTV GGKVVLITGG SSGIGLAAAH KFAEAGAITV ICGRDQDKLD EACKEAKAKG YNFVAYPADI ADMADCDRFL KELIANHGGV DFLINNAGRS IRRAIEASYD RFHDFERTMQ LNYFGCLRVT MGLLPGMAAR RKGHVVNISS IGVLTNAPRF SAYVASKAAL DAWTRCASSE YADLGIGFTT ISMPLVRTPM IAPTNLYNNV PTLSPEEAAD MIAQACIFKP VRIATRLGIA GQVLHALVPR IAQIAMNTSF RMFPDSSAAK GEKGGKGEKS ARPQLSAEAV AMQQMMQGIH F
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