| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4010 |
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| Symbol | |
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| ID | 4013338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4208999 |
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| End bp | 4210075 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637943659 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_550802 |
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| Protein GI | 91789850 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.275251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.168772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAG CCTTCTGGCA CGGCAGACGC GTCTTTCTCA CTGGGCACAC CGGCTTCAAG
GGCAGCTGGA TGTCCCTGTG GCTTCAATCT CTAGGTGCGA ACCTCACAGG TTATGCTCTT
CAATCACCAA CCCAGCCCAG CCTGTTTGAT GAGGCTAAGG TGGGACTAGG CATGCGCTCC
ATCATTGGCG ACATTCGTGA CTTGGCATTC CTGCAAAAGG CTATGCAGGA ATGCCAGCCC
GAAATCGTCA TCCACATGGC GGCACAACCG TTGGTACGAT ATTCCTACGC AAATCCGGTG
GAAACCTATT CCACCAACGT AATGGGCACC GTGCATCTCC TCGAGACCGT ACGTCATGCT
CCCAGCGTCA AGGCCGTGGT CAATATCACC ACTGACAAAT GCTACGAAAA CCGCGAATGG
GCTTGGGGCT ATCGTGAAAA CGAGCCAATG GGCGGCTACG ACCCCTACAG CAACAGCAAG
GGTTGTGCTG AACTGGTCAG CTCTGCTTAC CGGTCTTCCT TCTTCAACGC GAACAGCCAT
GCACAACACG GCGTTGGCCT GGCTACCGTC CGAGCCGGCA ACGTCATCGG CGGGGGCGAT
TGGGCGCAGG ATAGATTAAT TCCCGACATC CTCGCTGCTT TCGAACAAGG CCAGCGCGTC
AACATCCGCA ACCCCCACTC CATCCGCCCT TGGCAACATG TGTTGGAGCC CTTGCGCGGC
TACCTCACGC TGGCCGAACG CCTTTTTGAG CACGGCCCCA GCTATGCCGA GGGCTGGAAC
TTTGGACCCA ACGATGAAGA TGCCAAACCG GTTGGCTGGA TCGTCGAGCA AATGGCTGCG
ATGTGGGGCG AGGGTGCACA GTCGCAAATC GACAACGGCG AGCATCCGCA CGAGGCGAAC
TACCTCAAGC TCGATATATC CAAAGCCCGC AGCCGCCTGG ACTGGCACCC CACGCTGCGC
CTGAACGATG CCTTGGCACT CATCATCGAA TGGTCCAAGC AGCGCCAGGC GGGTGCTGAC
ATCCGCGAGC TGACCTTGGC CCAGATACAC TCTTATCAAA CATTGACCGA AAACTGA
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| Protein sequence | MNPAFWHGRR VFLTGHTGFK GSWMSLWLQS LGANLTGYAL QSPTQPSLFD EAKVGLGMRS
IIGDIRDLAF LQKAMQECQP EIVIHMAAQP LVRYSYANPV ETYSTNVMGT VHLLETVRHA
PSVKAVVNIT TDKCYENREW AWGYRENEPM GGYDPYSNSK GCAELVSSAY RSSFFNANSH
AQHGVGLATV RAGNVIGGGD WAQDRLIPDI LAAFEQGQRV NIRNPHSIRP WQHVLEPLRG
YLTLAERLFE HGPSYAEGWN FGPNDEDAKP VGWIVEQMAA MWGEGAQSQI DNGEHPHEAN
YLKLDISKAR SRLDWHPTLR LNDALALIIE WSKQRQAGAD IRELTLAQIH SYQTLTEN
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