Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4003 |
Symbol | |
ID | 4013331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4201215 |
End bp | 4202588 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637943652 |
Product | ABC transporter related |
Protein accession | YP_550795 |
Protein GI | 91789843 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.584674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.718876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTG ACGATATTGC CATCACCGTT CAAGGCGTGT CCAAGCGCTA TGAGCTTTAC CACAAACCCA GTGACCAGCT TAAGCAGTTC CTGCTGCCGC GGCTTCAGCG TCTCACAGGG CAACCCCAGC ACCATTACTT TCAGGAGTTT TGGGCACTGA AGGATGTTTC ATTCGATATA AGAAGAGGTG AGGCCTTTGG CATCGTGGGC CGCAACGGTA GCGGTAAAAG CACGTTGCTC CAGATCATTA CTGGGACTCT TTCGCCAACA ACCGGAACCG TTTCCACGAG GGGGCGGGTG GCAGCCTTGC TTGAGTTGGG CTCTGGCTTC GACCCTGAAT TCACCGGGCG TGAAAATATC TACATGAACG GGGCGCTACT GGGTTTTGAT CGCCAGCAAA TCGACCAGAA ATTTGATGCC ATCGCCGCGT TCGCCGACAT AGGCTTGCAC CTGGATCAGC CCATTAAGTC CTACTCAAGC GGAATGGTGG TCCGCCTTGC CATTGCCGTG CAGACTCAGG TCGAGCCCGA CATACTTATT GTTGATGAAG CACTCGCTGT CGGCGATGCC CTATTTCAAA AACGCTGCTA TCGACAGATC GACAAATTGC TGGATAACGG GTGCACCCTG CTTTTTGTGT CTCATGATCA GGAAATAGTA CGGACGCTCA CGAGCAGGGC AGTCTTTTTG AATGCGGGAC TCCCGGTCAA ATATGGCGCC ACAACCGACG TTTTATTTGC GTACCGGGAA TTTCTTCAGC AACAGGAAGA GGCCGCCTTC CTTGATCTCC AGGAAAGGTC CAAACAAGAG CTCTTGCCCC AACCCACCAA GAAATCTTAT GGCAGGCGTG ATGTTGAGAT ACTGGGTGTT GAAGTTCTTG CATCCGATAA AACTCGACAA AGTGTGTTTT ATGCGGGTGA CACCATAACG ATTGCTATCG AATGCGTTTG CAATACAGAT ATTGAAAACC TCAATATTGC CTTTCGCATA CTGAACAAGG AAGGCGTCAA GGTCACCACA TGGGGGACAT TGAATGAAGA CATGCCCAAC TTCCCCACCC ATCTTCAAAG TACTTTTTGG AATAAGCACT TTTTCAAGGG CGACACATTT AAAGTGAACT TTACCGGCAG TTGCAATCTC AGCGCAAATC TGTACGAGAT ACAAGCGACC GTGACACGAG AGCACGACCA GTACTACGGC AATCAACAAG TGCTTCACTG GCTGGACGAA GCGAGCCACT TTACTGTGAT CCTGAAAAAC AAAGAATATG TTTTCGACGG AATTTGTGAT TTAGGTTTAA GGTCAAGCGT GGAACTGGGA AGTAGCACTT CAACGGTTGA GCCACATCAA CCCATAACGC CTTCTGCCTC CTGA
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Protein sequence | MSSDDIAITV QGVSKRYELY HKPSDQLKQF LLPRLQRLTG QPQHHYFQEF WALKDVSFDI RRGEAFGIVG RNGSGKSTLL QIITGTLSPT TGTVSTRGRV AALLELGSGF DPEFTGRENI YMNGALLGFD RQQIDQKFDA IAAFADIGLH LDQPIKSYSS GMVVRLAIAV QTQVEPDILI VDEALAVGDA LFQKRCYRQI DKLLDNGCTL LFVSHDQEIV RTLTSRAVFL NAGLPVKYGA TTDVLFAYRE FLQQQEEAAF LDLQERSKQE LLPQPTKKSY GRRDVEILGV EVLASDKTRQ SVFYAGDTIT IAIECVCNTD IENLNIAFRI LNKEGVKVTT WGTLNEDMPN FPTHLQSTFW NKHFFKGDTF KVNFTGSCNL SANLYEIQAT VTREHDQYYG NQQVLHWLDE ASHFTVILKN KEYVFDGICD LGLRSSVELG SSTSTVEPHQ PITPSAS
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