| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3995 |
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| Symbol | |
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| ID | 4013323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4189966 |
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| End bp | 4191459 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637943644 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_550787 |
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| Protein GI | 91789835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.495687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTGG GCCGCAATCT GCTGGCGGGG ATTGCCAGTT CGGCTTGGTC AGCGCTGGTT
GGCTTGACGG TTGTTCCTTT TTATCTCAAA TATCTCGGAA TAGAAGCCTA CGGTCTAATT
GGGTTTTTTC TGACGACCCA GGCGTTGCTT CAACTCCTTG ACATGGGTAT GGCTCCGACC
ATCAACCGGG AGGTTGCGAG ATATTCAGCC TCTGGAAATT TGCAGGAATC AGGGACACTG
TTGCATACGT TGGCCATGGT TTACTGGGCG ATGGCTGTGG CAATCGCCGT GCTGATCGCG
GCGGTCGCGC CATGGATTGC GCAATACTGG ATCCAGTCCA GACAACTCTC GGCGCAAACA
GTCTCACATG CAGTGGTGTT AATGGGACTG GTGGTGGCCT GCCGCTGGCC GATCGGCTTG
TATCAGGGGG CGCTGATTGG CGCGGAACGT TTGACGGTAC TGAGTGGCAT CAATATTGTC
ATGACCACAG CTGGAAGCGT GGGGGCGGTG GCAGTGCTTG CTCTTGTCTC GCCCACCATT
GAGGCATTTT TTGTATGGCA GGCTTGCATG GGTCTGGTTT ATGCAGTAGC AATACGCGGG
GCTGCCTGGC GAATAATTGG AAAAGTTAAA AAAATAAGTT TTGATATTGA TAAGTTGAAA
AGCGTATGGC GGTTTACTGC CAATATGAGC GGCATTGGAC TGACGGCACT GGTCATTACG
CAGTTAGACA AGGTGATACT CAGCAAAACG TTGGGATTGG AAGAGTTTGG CCACTACATG
CTGGCTATGG TGGTTGTAAC TGGTTTGCAG GTTTTTATCA CCCCCCTGTT CAATGTCATT
TATCCTCGTT TTTCCGCACT GGTCGTTAAT GGTGAGATCG GGGAACTGAT CAATCTATAC
CGATTGGGAA CGCGTATGCT CGCAACGGTG CTTTTCCCTA TCGCCATGGT ATTGGCCATT
TTCGCAGAGG ATTTGGTGCT GGTTTGGACA GGTAATCCGA CTATAGCATC AAGCGTAGCA
CCAATAATGG CTTTAATGGC TTTGGGTTCG GCCGTGCACG GAACCATGTA TTTCCCATAT
GCACTGCAAT TGGCTTTTGG AATGCCGAGG CTGGCGCTGA CAATCAATAC TATCCTGATG
ACAGTGATGG TCCCTTTGAT TATTGGTTTT TCACTGCAAT ATGGGGCGCT AGGCGGTGCT
ATGGCATGGC TTGTATTACA CGTGTCGTAC CTGTTATTGG GAACGTGGAT GACACATCGC
CACCTGCTAA AAGGAACTGG AACTCAATGG CTTTTCCACG ACGTCGGTAT ACCGTTTGCA
CTCTCTGTCC TGGCTGGCCT GACAGGGCAT TACGCCGTCA GCGATGCGGA ATACTCTTTC
TTGGTGAAAT TAATTTATTT GATGGGGCTA TCTCTCGTGG TAGTCGTTAT TTCCATTTTT
ACTCTGCCAG AAAAATCGAA GACTATTTTT TTTGGTATAT TCAAAAAAAC TTGA
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| Protein sequence | MKLGRNLLAG IASSAWSALV GLTVVPFYLK YLGIEAYGLI GFFLTTQALL QLLDMGMAPT
INREVARYSA SGNLQESGTL LHTLAMVYWA MAVAIAVLIA AVAPWIAQYW IQSRQLSAQT
VSHAVVLMGL VVACRWPIGL YQGALIGAER LTVLSGINIV MTTAGSVGAV AVLALVSPTI
EAFFVWQACM GLVYAVAIRG AAWRIIGKVK KISFDIDKLK SVWRFTANMS GIGLTALVIT
QLDKVILSKT LGLEEFGHYM LAMVVVTGLQ VFITPLFNVI YPRFSALVVN GEIGELINLY
RLGTRMLATV LFPIAMVLAI FAEDLVLVWT GNPTIASSVA PIMALMALGS AVHGTMYFPY
ALQLAFGMPR LALTINTILM TVMVPLIIGF SLQYGALGGA MAWLVLHVSY LLLGTWMTHR
HLLKGTGTQW LFHDVGIPFA LSVLAGLTGH YAVSDAEYSF LVKLIYLMGL SLVVVVISIF
TLPEKSKTIF FGIFKKT
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