Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3979 |
Symbol | slmA |
ID | 4013346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4172241 |
End bp | 4172891 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943628 |
Product | nucleoid occlusion protein |
Protein accession | YP_550771 |
Protein GI | 91789819 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.56213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACT TAGCGTCTGA ATCCGAACTG AGCCCGAACG CCACGCCAGC TTCTGCCGAG TCCGCCGTGC GCAAGCGTCC CAAGCCGGGT GAGCGCCGGG TCCAGATCCT TCAGGCACTG GCCACCATGC TGGAGCAGCC GGGTGCAGAA CGCATCACAA CGTCGGCGCT GGCGGCCAGG CTGGAGGTGA GCGAGGCGGC CCTGTACCGG CATTTCGCCA GCAAGGCGCA GATGTTTGAA GGGCTGATCG AGTTCATCGA ACAAACCGTG TTCACGCTGG TCAACCAGAT CGGCGAGCGC GAGACAGACC ATGCGGCGCG CACCCGCAAA CTCGTGGTGA TGGTGCTGCA GTTTGCCGAA AAGAATCCGG GCATGACACG TGTGATGGTG GGCGATGCAC TGGTGTTTGA AAATGACCGG TTGCAAGAGC GCATGAACCA GTTCTTCGAC AAGCTCGAGT CCAGCCTCAA GCAGAGCCTG CGCGACGCAG CGGCCGCCAG CGGCGCCGCC ACGCCCACGG TCGATGCTCA GGTGCGTGCC TCGGTGATCG TGGCCTTCAT GGTCGGCCGT TTGCAGCGCT TTGCCCGCTC GGGCTTCAAG CGCCTGCCGT CGGAGCATCT CGAAGCCAGC CTGGCCAGTA TATTGGGCTA A
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Protein sequence | MSDLASESEL SPNATPASAE SAVRKRPKPG ERRVQILQAL ATMLEQPGAE RITTSALAAR LEVSEAALYR HFASKAQMFE GLIEFIEQTV FTLVNQIGER ETDHAARTRK LVVMVLQFAE KNPGMTRVMV GDALVFENDR LQERMNQFFD KLESSLKQSL RDAAAASGAA TPTVDAQVRA SVIVAFMVGR LQRFARSGFK RLPSEHLEAS LASILG
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