Gene Bpro_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3979 
SymbolslmA 
ID4013346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4172241 
End bp4172891 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID637943628 
Productnucleoid occlusion protein 
Protein accessionYP_550771 
Protein GI91789819 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.56213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT TAGCGTCTGA ATCCGAACTG AGCCCGAACG CCACGCCAGC TTCTGCCGAG 
TCCGCCGTGC GCAAGCGTCC CAAGCCGGGT GAGCGCCGGG TCCAGATCCT TCAGGCACTG
GCCACCATGC TGGAGCAGCC GGGTGCAGAA CGCATCACAA CGTCGGCGCT GGCGGCCAGG
CTGGAGGTGA GCGAGGCGGC CCTGTACCGG CATTTCGCCA GCAAGGCGCA GATGTTTGAA
GGGCTGATCG AGTTCATCGA ACAAACCGTG TTCACGCTGG TCAACCAGAT CGGCGAGCGC
GAGACAGACC ATGCGGCGCG CACCCGCAAA CTCGTGGTGA TGGTGCTGCA GTTTGCCGAA
AAGAATCCGG GCATGACACG TGTGATGGTG GGCGATGCAC TGGTGTTTGA AAATGACCGG
TTGCAAGAGC GCATGAACCA GTTCTTCGAC AAGCTCGAGT CCAGCCTCAA GCAGAGCCTG
CGCGACGCAG CGGCCGCCAG CGGCGCCGCC ACGCCCACGG TCGATGCTCA GGTGCGTGCC
TCGGTGATCG TGGCCTTCAT GGTCGGCCGT TTGCAGCGCT TTGCCCGCTC GGGCTTCAAG
CGCCTGCCGT CGGAGCATCT CGAAGCCAGC CTGGCCAGTA TATTGGGCTA A
 
Protein sequence
MSDLASESEL SPNATPASAE SAVRKRPKPG ERRVQILQAL ATMLEQPGAE RITTSALAAR 
LEVSEAALYR HFASKAQMFE GLIEFIEQTV FTLVNQIGER ETDHAARTRK LVVMVLQFAE
KNPGMTRVMV GDALVFENDR LQERMNQFFD KLESSLKQSL RDAAAASGAA TPTVDAQVRA
SVIVAFMVGR LQRFARSGFK RLPSEHLEAS LASILG