| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3978 |
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| Symbol | |
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| ID | 4013345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4170796 |
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| End bp | 4172007 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943627 |
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| Product | mandelate racemase/muconate lactonizing enzyme |
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| Protein accession | YP_550770 |
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| Protein GI | 91789818 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.610383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CCAACGCCCG CGTCATCGTC TGCAGCCCCG GCCGCAACTT CGTCACGCTC
AAGATTGAAA CCGATGAGGG CCTGACCGGC ATCGGCGACG CCACGCTCAA TGGCCGCGAG
CTTGCGGTGG CGAGCTACCT GACCGACCAT GTGATTCCCT GCCTGATCGG GCGGGATGCG
CACCAGATTG AAGACATCTG GCAATACCTT TACAAGGGTG CGTACTGGCG GCGCGGGCCG
GTCACCATGA GCGCCATCGC CGCGGTCGAT ACGGCGCTGT GGGACATCAA GGCCAAGGCC
GCGAACCTGC CGCTGTACCA GCTGCTCGGC GGACGCAGCC GCACCGGGGT GATGGTCTAC
GGCCACGCCA ATGGCAAGGA CCTCGAACAA ACCGTCGATG AAGTTCTGCG CTACAAGGAA
ATGGGCTACC AGGCCATTCG CGCACAGAGC GGCGTGCCGG GACTGGACAA GGTCTACGGC
GTAGGCAAAG GCACGCTGTT CTACGAACCC GCGGACGCCG ACCTGCCCGG CGAGCATGAC
TGGAGTTCGG AGAAATACCT GCTGCACACG CCCAAACTGT TCGACGCAGT GCGCCAGGCC
GTCGGGCCCG ACATTCACCT GCTGCACGAC GTGCACCACC GCCTCACGCC CATCGAGGCG
GCGCGGCTGG GCAAATCACT GGAGCCCTAC CACCTGTTCT GGATCGAGGA CGCCACACCG
GCGGAGAACC AGGAAGCGTT CAAACTGATA CGCCAGCACA CCACCACGCC GCTGGCGGTG
GGCGAAATCT TCAACTCGCT GTGGGACTGC AAGGACCTGA TCCAGAACCA GCTGATCGAC
TACATTCGCG CGACGGTGGT CCACGCTGGC GGCATCACGC ACCTGCGGCG CATTGCCGAC
TTTGCGGCGA TGTACCAGGT GCGCACCGGC TGCCACGGCG CGACGGACCT GTCACCGGTG
TGCATGGGCA CGGCCCTGCA CTTTGACACC TGGGTGCCGA ACTTCGGCGT GCAGGAATAC
ATGCGGCACA CCGAGGCGAC CGACGAAGTG TTTCCGCATG CCTACAGTTT CAACAAGGGT
TTCATGCACT GCGGCGAAGC TGTCGGTCAC GGCGTGGAGA TCGACGAGAA GCTGGCCGCC
AAATATCCCT ACCAGCGCGC CTACCTGCCG GTTAACCGGC TGCAGCATGA CGGCACGTTG
TGGAACTGGT GA
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| Protein sequence | MKITNARVIV CSPGRNFVTL KIETDEGLTG IGDATLNGRE LAVASYLTDH VIPCLIGRDA
HQIEDIWQYL YKGAYWRRGP VTMSAIAAVD TALWDIKAKA ANLPLYQLLG GRSRTGVMVY
GHANGKDLEQ TVDEVLRYKE MGYQAIRAQS GVPGLDKVYG VGKGTLFYEP ADADLPGEHD
WSSEKYLLHT PKLFDAVRQA VGPDIHLLHD VHHRLTPIEA ARLGKSLEPY HLFWIEDATP
AENQEAFKLI RQHTTTPLAV GEIFNSLWDC KDLIQNQLID YIRATVVHAG GITHLRRIAD
FAAMYQVRTG CHGATDLSPV CMGTALHFDT WVPNFGVQEY MRHTEATDEV FPHAYSFNKG
FMHCGEAVGH GVEIDEKLAA KYPYQRAYLP VNRLQHDGTL WNW
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