| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3964 |
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| Symbol | |
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| ID | 4013370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4156262 |
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| End bp | 4157248 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637943613 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_550756 |
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| Protein GI | 91789804 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.363818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC GACTGACGAT AAAAACCATG GCCCTATGCG CAATATTGGC GGGAACCATG
GGGTCATTTG GCATCGCCCA TGCGCAAACC AAGCTGAAGT GGGCCCACGT GTATGAAACG
TCGGAGCCCT ATCACAAGTG GTCGGTCTGG GCGGCAGACG AGATCAAGAA GCGCACCAAC
GGCCGCTATG AGATCCAGGT GTTCCCGGCT TCCACGCTGG GCAAGGAAAG CGACATCAAC
CAGGGCCTGC AGCTGGGCAC CGTCGACATC ATCATCTCGG GCGCCTCCTT CGCTGCCCGC
AGCTTTCCGC GCATCGGTGT GGGCTACTAC CCCTACACCT TCCGGGATCC AGAGCACCTG
CTCAAGTATT CGAAGAGCGA TGTCTTCAAG GAACTGGCCG ACGGCTACAA GCAGAAAACC
GGCGTGCAGA CCGTCGCCGT CACCTACTAC GGCGCACGCC ACTCCACCAG CAACAAGCTC
TTCAAGAACT GCGATGAAAT GAAGGGCCTG AAGATGCGGG TGCCCGACGT GCCCGCCTAC
ATGGCCTTGC CGCGCGCCTG CGGCGCCAAC CCGACGCCGA TCGCTTTTGC CGAGGTCTAC
CTGGCCCTGC AAAACGGCAC GGTCGATGCG CAGGAAAATC CGCTGCCCAC CATCGAAGCC
AAGAAGTTCT ACGAGGTCCA GAAGAACATC ATCCTGACCG GCCACATCCT CGATTCGCTG
GTGACGCAAG TCGGCCCCCA CGTCTGGACC AAGCTCAGCG ATGCGGACAA GAAAATCTTC
ACCGACGTGA TGCAGGAAGC AGCGGCCAGC GCCACGGCCG ACATCAAGAA GCGTGAAGGC
GAGCTGGTTG ACGAATTCAA GAAAAAGGGC CTGAACGTCG TCACGGTCAA CAAGGACGAG
TTCCGCGACC GCATCGTGAA AGCCGTGGAC ATGACGTCGA TGGGCTACGA CAAAAAGGAT
TGGAACCGCA TCCAGGCCCT CAAATAA
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| Protein sequence | MTKRLTIKTM ALCAILAGTM GSFGIAHAQT KLKWAHVYET SEPYHKWSVW AADEIKKRTN
GRYEIQVFPA STLGKESDIN QGLQLGTVDI IISGASFAAR SFPRIGVGYY PYTFRDPEHL
LKYSKSDVFK ELADGYKQKT GVQTVAVTYY GARHSTSNKL FKNCDEMKGL KMRVPDVPAY
MALPRACGAN PTPIAFAEVY LALQNGTVDA QENPLPTIEA KKFYEVQKNI ILTGHILDSL
VTQVGPHVWT KLSDADKKIF TDVMQEAAAS ATADIKKREG ELVDEFKKKG LNVVTVNKDE
FRDRIVKAVD MTSMGYDKKD WNRIQALK
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