| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3956 |
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| Symbol | |
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| ID | 4013362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4146149 |
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| End bp | 4148605 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943605 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_550748 |
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| Protein GI | 91789796 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.13686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.861875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT TCACAGTCAA AAGAGTAGCC GTGCTCGGCG CCGGTGTGAT GGGCGCGCAG
ATCGCCGCTC ATCTGGTCAA TGTCAAGGTG CCCGTGGTGC TGTTTGACCT GCCCGCAAAA
GACAACGATG GGGGCGGGGC CCCGTCGTCT TCCAAGTCTT CGAAAAATGG CATCGTCACC
AAGGCGATCG AAGGCCTGAA AAAGCTCAAG CCCGCGCCGC TGGGCGTACC CGAGGATGCG
GCGCTGATCC AGCCGGCCAA CTACGAAGAG CACATGGAGC AGCTGTTGGA GTGCGACCTC
ATCATCGAGG CGATTGCCGA GCGCATGGAC TGGAAGACCG ACCTGTACCA CAAGATCGCC
CCCTTCATTG CCGAAGGCGC GATTGTGGCC AGCAACACCT CGGGCCTGTC GATCACCAAA
CTCAGCGAAG CCCTGCCCGA ATCGATCAAG CCGCGTTTTT GCGGCATCCA CTTTTTCAAT
CCGCCGCGCT ACATGACACT GGTGGAGCTG ATCAACACGC CCACCACCGG GCCGAAAGTG
CTCGACGACC TGGAAGCCTT TGCGGTCAGC GCACTGGGCA AGGGCGTGAT CCGCGCGCAC
GACACGCCCA ACTTCATTGC CAACCGCGTC GGCATTGCCG GCATGCTGGC AACCATCAAG
GAGGCCGAGA CCTTTGGCCT GACGTATGAC GTGGTTGACG ACCTGACCGG CAAGAAACTG
GGCCGCGCCA GCTCCGGCAC CTTCCGCACT GCTGACGTGG TGGGCCTGGA CACCATGGCG
CATGTGATCA GGACGCTGCA GGACAATCTC GGTCCCGGCA AGGTCGAAGA TCCGTTCTCG
GACATCTACG GCACGCCGCC GGTCCTGGCG AAACTGCTGG AATCCAAAAG CCTGGGCCAG
AAAACCGGCG CCGGCTTTTA CAAGAAGGTC GGCCGGGACA TCCTGCGCCT CGACCCCGAA
AGCATGGAGT ACGTGGCCGC AGGCGCCAAG GCCAACGAGG TCGTCGGTCG CATGCTGAAA
AAACCGGCCG GCGAGCGGCT GAAGCTGCTG CGCGAGGCCG AGGGCGCCGA AGCGCGATTC
CTCTGGGCCA TCCTGCGCGA CCAGTTCCAC TATGCCGCGG TGCACCTCGA AAGCATTGCC
GAAACCGCGC GCGACATCGA CTTTGCGATG CGCTGGGGCT TTGGCGCCAA GCAAGGCCCG
TTCGAGTTGT GGCAGCAGGC CGGCTGGCAG CAGGTGGCCA GCTGGATCCA GGAAGACATT
GAGGCGGGCA AGGCCTTGAG CAAAGCGCCG CTGCCCGACT GGGTGTTCAA GGGCCCGGTG
GCCGACGCGG GCGGTGTGCA CACCGCGGAA GGTTCGTGGA GCGCCTCGGC GCAAAAATTC
ATTCCGCGCC GCAAGCTGCC CGTTTATGAG CGCCAGTATT TCCCCGAGGA CGTGCTGGGT
GCCAACGCCC CGGCTTTCGA AACCGCCGGT ACCACGCTGC ATGAAGACGA TGCCATCCGC
CTCTGGACGC TGGACGGTGC GAACGGAGAA AAAGGCGACG TGCTGATTGC CAGCATCAAG
ACCAAGATGC ACGCCATCAG CCCCGATGTG GCGGAAGGCC TGGCGATGGG CGTGGACCTC
GCCGAGAAGG GTTACAAGGG CATGGTCATC TGGTCCAACG ACGAGATGTT CTCGGCCGGC
GCCGACCTGC AGGCCATGCT GCCCGCCTTC ATGATGGGCG GCGCCAGGTC GATTGAAGGC
GCGGAAGCCG AACTGCAAAA CGTCATGCTC AAGCTGCGCT ACGCGGCTGT GCCTGTCGTG
TCGGCAATTC GCGGCCTGGC GCTGGGCGGT GGCTGCGAGA TGGCCGTGTA CTCGGCCAAA
CGCGTCGCCG CGATGGAAAG CTACATCGGC TTGGTGGAAG TCGGTGTCGG CCTCGTGCCC
GGTGCCGGCG GCCTGGCGTA CATTGCGCGC CGCGCGGCAG AAAACGCCGC CACGTCCACC
AACAAGGACA TATTGCCTTT CCTGACCGAA GACTTCACCG CCGCCGCCAT GGCCAAGGTG
GGCACCAGCG CGATTGAAAG CCGCAAGATC GGCTACCTGC TGGACAGCGA CGTCATCGTG
CCGAACAAGG ACGAACTGCT GTTCGTGGCG CTGAACGAGG CCCGCGCCCT GTTCAACTCG
GGCTACCGCG CGCCGCACAG GCGGCCCTTC CCGGTCGTGG GCCGCAACGG CCTGGCCACC
ATCAAGGGCC AGCTGGTCAA CATGCGCGAC GGCGGCTTCA TCAGCGCGCA TGACTTTCAC
ATCGCCGGCC TGATCGCCAA CGTGGTGTGT GGTGGCGACG TGGATGCCGG CACGCTGGTC
ACGGAGGAAT ATCTGATGAC GCTGGAACGC AAGGCCTTCT GTTCGCTGCT CGAAAACCCG
AAAACGCAGG AACGCATCAT GGGCATGATG AGCACCGGCA AACCGGTGAG GAATTGA
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| Protein sequence | MQKFTVKRVA VLGAGVMGAQ IAAHLVNVKV PVVLFDLPAK DNDGGGAPSS SKSSKNGIVT
KAIEGLKKLK PAPLGVPEDA ALIQPANYEE HMEQLLECDL IIEAIAERMD WKTDLYHKIA
PFIAEGAIVA SNTSGLSITK LSEALPESIK PRFCGIHFFN PPRYMTLVEL INTPTTGPKV
LDDLEAFAVS ALGKGVIRAH DTPNFIANRV GIAGMLATIK EAETFGLTYD VVDDLTGKKL
GRASSGTFRT ADVVGLDTMA HVIRTLQDNL GPGKVEDPFS DIYGTPPVLA KLLESKSLGQ
KTGAGFYKKV GRDILRLDPE SMEYVAAGAK ANEVVGRMLK KPAGERLKLL REAEGAEARF
LWAILRDQFH YAAVHLESIA ETARDIDFAM RWGFGAKQGP FELWQQAGWQ QVASWIQEDI
EAGKALSKAP LPDWVFKGPV ADAGGVHTAE GSWSASAQKF IPRRKLPVYE RQYFPEDVLG
ANAPAFETAG TTLHEDDAIR LWTLDGANGE KGDVLIASIK TKMHAISPDV AEGLAMGVDL
AEKGYKGMVI WSNDEMFSAG ADLQAMLPAF MMGGARSIEG AEAELQNVML KLRYAAVPVV
SAIRGLALGG GCEMAVYSAK RVAAMESYIG LVEVGVGLVP GAGGLAYIAR RAAENAATST
NKDILPFLTE DFTAAAMAKV GTSAIESRKI GYLLDSDVIV PNKDELLFVA LNEARALFNS
GYRAPHRRPF PVVGRNGLAT IKGQLVNMRD GGFISAHDFH IAGLIANVVC GGDVDAGTLV
TEEYLMTLER KAFCSLLENP KTQERIMGMM STGKPVRN
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