Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3954 |
Symbol | |
ID | 4013360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4145139 |
End bp | 4145627 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637943603 |
Product | hypothetical protein |
Protein accession | YP_550746 |
Protein GI | 91789794 |
COG category | [S] Function unknown |
COG ID | [COG2852] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0732034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.657782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAACTG AACAGAACTT ATCCGGCGCG CCTGATTCAG GTTCCCTCTC CCGCACGCGG GAGAGGGCTA GGGTGAGGGC AAGAGCGCTT CGCCAAGGTC AAACGGATGC CGAGATATTG CTGTGGTCAA AGTTGAGAGG TCGCCAGGTC AGAGATCTGA AGTTTCGGCG TCAACATCCG ATTGGTCCGT ATTTCGCTGA CTTCGCATGT CTTGAAATAG GCTTGGTCAT TGAACTGGAT GGCGGCCAGC ATGCTGAGGG CGATGCCACC AGTTATGACC AGAAGCGCAG TAGCGACATG GCTGCCCTGG GTTTTCAGAC CTTGCGATTC TGGAACAACG ACGTCCTGAG CAAGACAGAG GCTGTACTGG AAAAGGTATG GCAAGTAGCC GACACCCTCA CCCCAGCCCT CTCCCGCAAG CGGGCGAGGG AGCAAGAAGG CCCCGAATCC TGTACCCAGT CCCCTCTCCC GCTGGCGGGA GAGGGTTAG
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Protein sequence | MTTEQNLSGA PDSGSLSRTR ERARVRARAL RQGQTDAEIL LWSKLRGRQV RDLKFRRQHP IGPYFADFAC LEIGLVIELD GGQHAEGDAT SYDQKRSSDM AALGFQTLRF WNNDVLSKTE AVLEKVWQVA DTLTPALSRK RAREQEGPES CTQSPLPLAG EG
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