Gene Bpro_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3954 
Symbol 
ID4013360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4145139 
End bp4145627 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID637943603 
Producthypothetical protein 
Protein accessionYP_550746 
Protein GI91789794 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0732034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.657782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACTG AACAGAACTT ATCCGGCGCG CCTGATTCAG GTTCCCTCTC CCGCACGCGG 
GAGAGGGCTA GGGTGAGGGC AAGAGCGCTT CGCCAAGGTC AAACGGATGC CGAGATATTG
CTGTGGTCAA AGTTGAGAGG TCGCCAGGTC AGAGATCTGA AGTTTCGGCG TCAACATCCG
ATTGGTCCGT ATTTCGCTGA CTTCGCATGT CTTGAAATAG GCTTGGTCAT TGAACTGGAT
GGCGGCCAGC ATGCTGAGGG CGATGCCACC AGTTATGACC AGAAGCGCAG TAGCGACATG
GCTGCCCTGG GTTTTCAGAC CTTGCGATTC TGGAACAACG ACGTCCTGAG CAAGACAGAG
GCTGTACTGG AAAAGGTATG GCAAGTAGCC GACACCCTCA CCCCAGCCCT CTCCCGCAAG
CGGGCGAGGG AGCAAGAAGG CCCCGAATCC TGTACCCAGT CCCCTCTCCC GCTGGCGGGA
GAGGGTTAG
 
Protein sequence
MTTEQNLSGA PDSGSLSRTR ERARVRARAL RQGQTDAEIL LWSKLRGRQV RDLKFRRQHP 
IGPYFADFAC LEIGLVIELD GGQHAEGDAT SYDQKRSSDM AALGFQTLRF WNNDVLSKTE
AVLEKVWQVA DTLTPALSRK RAREQEGPES CTQSPLPLAG EG