Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3916 |
Symbol | |
ID | 4013400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4110380 |
End bp | 4112236 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943566 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_550709 |
Protein GI | 91789757 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.267662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCC CGAACGACTC CGCGCGCTTT GTGCCGCCCG CTGAACCCTC GCTCGCGATG GGCGTGATCG GCAACTGCGC GTTCAGCGCG CTGATTGACA TCCGCGGGCG CATTGTCTGG TGCTGCCTGC CGCGCTTTGA CGGCGACCCG GTGTTCAATG CGCTGCTGCA GCCCGGTACC GGCAGGATCG ACGGCGCCCA TACCAATACC GATACGCAGC CCAGCGCTTT TTCCATTGAA ATCGAGGATT TTGCCGAGTC CCGGCAATGG TATGAGCCCA ATACCGCCGT GCTGCATACC CAGCTGTTTG ACAAAAGCGG CCAGGGTATT GAGATCACCG ACTTCGCGCC GCGCTTTTTC AGCCGCTCAC GTTTTTTCCG GCCCATGACG CTGGTGCGGC GCGTGCGCCC CCTCTCCGGC GCGCCCCGCA TTCGCGTCTC GCTGGATGTC CGTTTTGACT GGGGCCGGCG TGCACCGCTG ATCACCCAGG GCAGCAACCA CCTGCGTTAT GTGGGCGATG CGCTGACGCT GCGGCTGAAC ACCGACGCGC CGCTGTCGCA CCTGCTGGCC CGGCAGCCCT TCGTGCTGAC CCGCGAGCAC AACTTTCTGC TGGGTGCCGA CGAGTCGCTG GCCGAGGGCA TTGCCGACAC GGCGCGCCTG TTTGAACAGG AGACCGTCTC GTATTGGAAA AAATGGAGCC AGCGCCTGCA CATCCCGCTG GAATGGCAGG AAGCCGTGAT ACGCGCCGCG ATCACGCTCA AGCTGTCCCT CTTTGAAGAC ACCGGCGCCA TCGTGGCGGC CATGACCACC AGCATTCCCG AGGCGCCCGG CAGCCAGCGC AACTGGGACT ACCGTTTTTG CTGGCTGCGC GATGCTTTCT TTGTGGTGCG CGCCCTCAAC AGCCTGTCGG AGGTCGGCAC CATGGAAGAC TACCTGCGCT GGCTCAGCAA CGTGGTGGTG CAGGCCAACG GCGGGCACAT CCAGCCGCTG TACGGCATTG GCCTGGAGCG CGAGCTGCCG GAGTCCGTGA TGGACCATCT GGGCGGCTAC CGCGGCATGG GGCCGGTGCG CGTGGGCAAC CAGGCGCAGG AGCACTTCCA GCATGACGTG TATGGCAATG TAGTGCTGGG TGCGGCGCAG GCCTTTCACG ACCACCGGCT GCTGCACCGC GCCGGCCTGG CCGAGTTCCA GCGGCTCGAA GCAGTGGGCG AGCAGGCCGC TCGCACCTAT GACCAGCCCG ACGCCGGCAT GTGGGAGCTG CGCACCCGTG CCCGGGTCCA CACCTCGTCG GCCCTGATGT GCTGGGCGGC CTGCGACCGG CTGGCCAAGA TCGCCCTGGT GCTTCACCTT CCCGAGCGTG CAGCCTACTG GCAGGACCAT GCACAGCGCA TGCAGGAGAA CATTTTGCGG AAGGCCTGGA GCGAGGAACG CCAGGCCTTT GCCGAGAGCT TTGGCGGCCG CGACCTGGAC GCCAGTGTGC TGCTGATGAT TGAAGTGGGC TTCATCGACC CGAAGGATCC GCGCTTCATT GCCACCGTCG ACGCGCTGGA AACCCATTTG TGCGACGGCC CCTACATGCG CCGCTACGAA GCGCCCGATG ATTTCGGCAA ACCCGAGACC GCCTTCAACA TCTGCACCTT CTGGCGCATT GATGCGCTGG CGCGCATAGG GCGCAAGGCG CAGGCGCGCG AGATTTTTGA GACCATGCTG GCCGCGCGCA ACCACGTAGG CCTGCTCTCC GAAGACACGC ACCCGGCCAG CGGCGAGATG TGGGGCAACT TTCCGCAAAC CTATTCCATG GTGGGCATCA TCAACGCGGC GGTCCGGCTT TCGGCGCCTT GGGAATCGCA GATATGA
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Protein sequence | MTAPNDSARF VPPAEPSLAM GVIGNCAFSA LIDIRGRIVW CCLPRFDGDP VFNALLQPGT GRIDGAHTNT DTQPSAFSIE IEDFAESRQW YEPNTAVLHT QLFDKSGQGI EITDFAPRFF SRSRFFRPMT LVRRVRPLSG APRIRVSLDV RFDWGRRAPL ITQGSNHLRY VGDALTLRLN TDAPLSHLLA RQPFVLTREH NFLLGADESL AEGIADTARL FEQETVSYWK KWSQRLHIPL EWQEAVIRAA ITLKLSLFED TGAIVAAMTT SIPEAPGSQR NWDYRFCWLR DAFFVVRALN SLSEVGTMED YLRWLSNVVV QANGGHIQPL YGIGLERELP ESVMDHLGGY RGMGPVRVGN QAQEHFQHDV YGNVVLGAAQ AFHDHRLLHR AGLAEFQRLE AVGEQAARTY DQPDAGMWEL RTRARVHTSS ALMCWAACDR LAKIALVLHL PERAAYWQDH AQRMQENILR KAWSEERQAF AESFGGRDLD ASVLLMIEVG FIDPKDPRFI ATVDALETHL CDGPYMRRYE APDDFGKPET AFNICTFWRI DALARIGRKA QAREIFETML AARNHVGLLS EDTHPASGEM WGNFPQTYSM VGIINAAVRL SAPWESQI
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