Gene Bpro_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3916 
Symbol 
ID4013400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4110380 
End bp4112236 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content65% 
IMG OID637943566 
Productglycoside hydrolase 15-related 
Protein accessionYP_550709 
Protein GI91789757 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.267662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC CGAACGACTC CGCGCGCTTT GTGCCGCCCG CTGAACCCTC GCTCGCGATG 
GGCGTGATCG GCAACTGCGC GTTCAGCGCG CTGATTGACA TCCGCGGGCG CATTGTCTGG
TGCTGCCTGC CGCGCTTTGA CGGCGACCCG GTGTTCAATG CGCTGCTGCA GCCCGGTACC
GGCAGGATCG ACGGCGCCCA TACCAATACC GATACGCAGC CCAGCGCTTT TTCCATTGAA
ATCGAGGATT TTGCCGAGTC CCGGCAATGG TATGAGCCCA ATACCGCCGT GCTGCATACC
CAGCTGTTTG ACAAAAGCGG CCAGGGTATT GAGATCACCG ACTTCGCGCC GCGCTTTTTC
AGCCGCTCAC GTTTTTTCCG GCCCATGACG CTGGTGCGGC GCGTGCGCCC CCTCTCCGGC
GCGCCCCGCA TTCGCGTCTC GCTGGATGTC CGTTTTGACT GGGGCCGGCG TGCACCGCTG
ATCACCCAGG GCAGCAACCA CCTGCGTTAT GTGGGCGATG CGCTGACGCT GCGGCTGAAC
ACCGACGCGC CGCTGTCGCA CCTGCTGGCC CGGCAGCCCT TCGTGCTGAC CCGCGAGCAC
AACTTTCTGC TGGGTGCCGA CGAGTCGCTG GCCGAGGGCA TTGCCGACAC GGCGCGCCTG
TTTGAACAGG AGACCGTCTC GTATTGGAAA AAATGGAGCC AGCGCCTGCA CATCCCGCTG
GAATGGCAGG AAGCCGTGAT ACGCGCCGCG ATCACGCTCA AGCTGTCCCT CTTTGAAGAC
ACCGGCGCCA TCGTGGCGGC CATGACCACC AGCATTCCCG AGGCGCCCGG CAGCCAGCGC
AACTGGGACT ACCGTTTTTG CTGGCTGCGC GATGCTTTCT TTGTGGTGCG CGCCCTCAAC
AGCCTGTCGG AGGTCGGCAC CATGGAAGAC TACCTGCGCT GGCTCAGCAA CGTGGTGGTG
CAGGCCAACG GCGGGCACAT CCAGCCGCTG TACGGCATTG GCCTGGAGCG CGAGCTGCCG
GAGTCCGTGA TGGACCATCT GGGCGGCTAC CGCGGCATGG GGCCGGTGCG CGTGGGCAAC
CAGGCGCAGG AGCACTTCCA GCATGACGTG TATGGCAATG TAGTGCTGGG TGCGGCGCAG
GCCTTTCACG ACCACCGGCT GCTGCACCGC GCCGGCCTGG CCGAGTTCCA GCGGCTCGAA
GCAGTGGGCG AGCAGGCCGC TCGCACCTAT GACCAGCCCG ACGCCGGCAT GTGGGAGCTG
CGCACCCGTG CCCGGGTCCA CACCTCGTCG GCCCTGATGT GCTGGGCGGC CTGCGACCGG
CTGGCCAAGA TCGCCCTGGT GCTTCACCTT CCCGAGCGTG CAGCCTACTG GCAGGACCAT
GCACAGCGCA TGCAGGAGAA CATTTTGCGG AAGGCCTGGA GCGAGGAACG CCAGGCCTTT
GCCGAGAGCT TTGGCGGCCG CGACCTGGAC GCCAGTGTGC TGCTGATGAT TGAAGTGGGC
TTCATCGACC CGAAGGATCC GCGCTTCATT GCCACCGTCG ACGCGCTGGA AACCCATTTG
TGCGACGGCC CCTACATGCG CCGCTACGAA GCGCCCGATG ATTTCGGCAA ACCCGAGACC
GCCTTCAACA TCTGCACCTT CTGGCGCATT GATGCGCTGG CGCGCATAGG GCGCAAGGCG
CAGGCGCGCG AGATTTTTGA GACCATGCTG GCCGCGCGCA ACCACGTAGG CCTGCTCTCC
GAAGACACGC ACCCGGCCAG CGGCGAGATG TGGGGCAACT TTCCGCAAAC CTATTCCATG
GTGGGCATCA TCAACGCGGC GGTCCGGCTT TCGGCGCCTT GGGAATCGCA GATATGA
 
Protein sequence
MTAPNDSARF VPPAEPSLAM GVIGNCAFSA LIDIRGRIVW CCLPRFDGDP VFNALLQPGT 
GRIDGAHTNT DTQPSAFSIE IEDFAESRQW YEPNTAVLHT QLFDKSGQGI EITDFAPRFF
SRSRFFRPMT LVRRVRPLSG APRIRVSLDV RFDWGRRAPL ITQGSNHLRY VGDALTLRLN
TDAPLSHLLA RQPFVLTREH NFLLGADESL AEGIADTARL FEQETVSYWK KWSQRLHIPL
EWQEAVIRAA ITLKLSLFED TGAIVAAMTT SIPEAPGSQR NWDYRFCWLR DAFFVVRALN
SLSEVGTMED YLRWLSNVVV QANGGHIQPL YGIGLERELP ESVMDHLGGY RGMGPVRVGN
QAQEHFQHDV YGNVVLGAAQ AFHDHRLLHR AGLAEFQRLE AVGEQAARTY DQPDAGMWEL
RTRARVHTSS ALMCWAACDR LAKIALVLHL PERAAYWQDH AQRMQENILR KAWSEERQAF
AESFGGRDLD ASVLLMIEVG FIDPKDPRFI ATVDALETHL CDGPYMRRYE APDDFGKPET
AFNICTFWRI DALARIGRKA QAREIFETML AARNHVGLLS EDTHPASGEM WGNFPQTYSM
VGIINAAVRL SAPWESQI