| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3903 |
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| Symbol | |
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| ID | 4013427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4097434 |
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| End bp | 4098156 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637943554 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_550697 |
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| Protein GI | 91789745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000353071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.052697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGG ATTGGCAAGT ATTTTTGAAT GACGATGGGA GCGGGCGCAC TTACCTGCAG
TGGATGATGG ACGCCTGGGG CTGGACGCTG TCCGTCGCTG GCTGTTCCTG GGTCGTTGCC
ATCGTGATGG GCGGCATCAT GGGCACGCTC AGAACCCTGC CCAACAGCCC CTGGCTGGTC
CGGCTGGCCA ATGTCTGGGT TGAAGTCTTT CGCAACGTTC CGTTGCTGGT TCAAATTTTC
ATCTGGTATT TCGTCATACC CAAGATGTTT CCGGCGATGA GAGACCTGCC AGGCTTTGTG
CTGGTCGTGT TTGCGCTGGG GTTTTTCACC TCGGCACGCA TTGCCGAGCA AGTCAGGGCC
GGTGTCCAGG CGCTGCCGCG AGGCCAGCGC TACGCCGGCA TGGCCATGGG TTTCACGACG
GCCCAGACCT ACCGCTATGT GATTTTGCCG ATGGCGATTC GCATCATCAT CCCGCCGCTG
ACCAGCGAGT CGATGAACCT GCTGAAAAAC TCGTCGGTGG CTTTTGCCGT GTCGATTGCC
GAGCTGACGA TGTTTGCGAT GCAGGCGCAG GAGGAAACGT CACGGGGCGT CGAGATTTAT
CTGGCCGTGA CGGCGCTGTA CGCCGTGTCG GCCTTTACCG TCAACCGGAT CATGGCTTTC
ATTGAAAAGA AAGTGCAGAT TCCGGGCTAC ATCGTGGCCG GCACCGCAGG TGGAGGACAC
TGA
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| Protein sequence | MTWDWQVFLN DDGSGRTYLQ WMMDAWGWTL SVAGCSWVVA IVMGGIMGTL RTLPNSPWLV
RLANVWVEVF RNVPLLVQIF IWYFVIPKMF PAMRDLPGFV LVVFALGFFT SARIAEQVRA
GVQALPRGQR YAGMAMGFTT AQTYRYVILP MAIRIIIPPL TSESMNLLKN SSVAFAVSIA
ELTMFAMQAQ EETSRGVEIY LAVTALYAVS AFTVNRIMAF IEKKVQIPGY IVAGTAGGGH
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