| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3839 |
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| Symbol | |
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| ID | 4013480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4030052 |
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| End bp | 4031245 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637943492 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_550635 |
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| Protein GI | 91789683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0951081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCT TCCGCAGAAC AATTTGTCTG GCGACGCTCG CCGCCGCCGC CTTGGCCATA
GCGCCCGCCG CGCTGGCACA AAAGACGCCT CCGAAAACAG CACCGCAAGA AGACATCGTG
TTGGGCGGCT CTATACCGCT GACGGGCGTG TTCGCCTTTG CGGGCATCGG CATTGACCAG
GGCATCAAGG ATTACCTGAC CATTCTCAAC GAGGGTGGCG GCATCAAAGG CCGCAAGGTG
CGCTACGTGC CCGAGGACAC CGGCTACAAG GTTGACCAGT CGATGGCGGC ATTCAAGAAA
ATTACCAGCC AGAACAAGGT CAGCCTTTAC TACGCTGACT CCACCGCGTT TGTCAAAACC
GTCAACCCCG AACTGGAGCG CAACCAGAAC ATCCTGATGA CCGGCGCCTC GTTCGCCAAG
GAAATCAGTG ACGCGCAGAA GTACCCGCTG CAGTTCATGG TGGGCCCCAA TTACAGCGAG
ATGGTCGGCA TCCTGCTGCA GTACATCGCC AAGACCAAAC CCGGCGCCAA GGTCGCGCTT
GTGTACTCGG ACACCGAGTT CGGCCGCGAC CCGGTCGACG CCGCACGGAC CGAGGCCAAG
AAACTGGGCC TGAACCTGGT CAGCGAAATC GTCACGCCGC CGAGCAGCGT GGACGTGTCG
GCCGAGGTCA TCAAGCTGCG CCGCGCGGAC CCCGACTACA CCATCTTTCA CGGCTACGTC
TCGGCACCCA TTCCTGAATT CATCAACCAG GCCAAGGCCC TGAATCTCAA GACCGCGTTC
ATGGGCACCT TCTGGAGCAT GGACAACTCG ACCGTCATGC GCATGGGCGC GAATGTCGAT
GGTTTTCTGG GCGTCATGCC TTACCGTTAC TACTACGACA CCGAAGGCAA AGCGCCGATG
CTGGAGCGCA TCCGCAAGAT GCGCCCCGAG TACCAGAGCA CAGGCTACAT GCAGGGCTTC
CTGAGCGCCA TGCTGCTGAC CGAGGCTGCC AAACGCACGT TGGATGCGGG CAATGAGCTG
ACCGGCAAGA ACATGAAAAC CGCGCTCAGC TCGATCCGCA ATTTCGACAC CGGCGGCGTC
ATTGGCGTGC CCTTGTCGAT CAAGGGCAAC TCCATTCCCG TGGGCCGCAT CTACCGGGCC
GACTTCAAGC AGCAGAAGAT GGTGCCGGCC TCCGAGTGGA TCAGTCTGCA GTAA
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| Protein sequence | MKSFRRTICL ATLAAAALAI APAALAQKTP PKTAPQEDIV LGGSIPLTGV FAFAGIGIDQ
GIKDYLTILN EGGGIKGRKV RYVPEDTGYK VDQSMAAFKK ITSQNKVSLY YADSTAFVKT
VNPELERNQN ILMTGASFAK EISDAQKYPL QFMVGPNYSE MVGILLQYIA KTKPGAKVAL
VYSDTEFGRD PVDAARTEAK KLGLNLVSEI VTPPSSVDVS AEVIKLRRAD PDYTIFHGYV
SAPIPEFINQ AKALNLKTAF MGTFWSMDNS TVMRMGANVD GFLGVMPYRY YYDTEGKAPM
LERIRKMRPE YQSTGYMQGF LSAMLLTEAA KRTLDAGNEL TGKNMKTALS SIRNFDTGGV
IGVPLSIKGN SIPVGRIYRA DFKQQKMVPA SEWISLQ
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