Gene Bpro_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3833 
Symbol 
ID4013513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4023473 
End bp4024447 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID637943486 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_550629 
Protein GI91789677 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC GAATCACTGA ATTGCTCGGC ATCCGCTACC CCATCATTCA GGGCGGCATG 
CAATGGGTGG GACGCGCCGA GCTGGCATCG GCCGTCTCAA ACGCGGGCGG CCTGGGCGTA
TTGACGGGCT TGACCCAGCC CACGCCTGAG GCGCTGGCGG CCGAGATTGC GCGCTGCCGC
AGCATGACCG ACAAGCCCTT CGGCGTGAAC CTGACGATCC TGCCCTCGGC CAAACCGCCG
CCCTATGAAG CCTATCTCGA TGTCGTCATC AACAGCGGCG TGAAGATTCT GGAAACCGCC
GGCAACAACC CCAGGGAATT CATCCTGAAG GCCAAGGCCG CCGGGGTCAA AATTATTCAC
AAGTGCACTT CGGTGCGGCA TGCCTTGTCG GCAGAGCGCA ATGGTGTCGA TGCCGTGTCC
ATCGACGGCT TTGAATGCGC GGGCCATCCG GGTGAAGACG ATGTCGGTGG ATTGGTGCTG
TTTGCGGCCG CTGCCGACCA AGTGAAGATT CCGCTGGTCG CCTCGGGCGG CATTGCCGAT
GGCCGCGGCA TGGCGGCGGC GCTGGCACTG GGCGCTGAAG GCATCAACAT GGGCACGCGC
TTTTGCGCGA CGCAAGAGGC GCCCATCCAT GAGCACATCA AGCAGGCGCT GATCCATGCA
GGCGAACGCG ACACGCAACT GATCTTCAGG ACGCTGAACA ACACCGGGCG GGTCCTCAAA
AATGCCATTT CAAGCGAGGT GGTGGCGCTG GAGCGGCAGC CGGGTGGCTG CGAGTTCAGT
GATATCCATC ACCTGGTGGC TGGCGCACGC GGGCGGGCGG CTCTCGAAAG CGGCGAGGTG
GATGGCGGCC TCGTCTGGGC CAGCCAGGTG GTGGGGCTGA TCCATGACAT CCCGACTTGC
GCGGAATTGA TGGCACGCAT GGTCGCTGAC TGCCGTGTGG CACTCGATCG CGGGCGCACG
ATGTTCGCCG CTTGA
 
Protein sequence
MKNRITELLG IRYPIIQGGM QWVGRAELAS AVSNAGGLGV LTGLTQPTPE ALAAEIARCR 
SMTDKPFGVN LTILPSAKPP PYEAYLDVVI NSGVKILETA GNNPREFILK AKAAGVKIIH
KCTSVRHALS AERNGVDAVS IDGFECAGHP GEDDVGGLVL FAAAADQVKI PLVASGGIAD
GRGMAAALAL GAEGINMGTR FCATQEAPIH EHIKQALIHA GERDTQLIFR TLNNTGRVLK
NAISSEVVAL ERQPGGCEFS DIHHLVAGAR GRAALESGEV DGGLVWASQV VGLIHDIPTC
AELMARMVAD CRVALDRGRT MFAA