Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3806 |
Symbol | |
ID | 4013525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3993277 |
End bp | 3995139 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637943459 |
Product | peptidase M48, Ste24p |
Protein accession | YP_550602 |
Protein GI | 91789650 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCGCG CGGATTTCAT TCACCTGGTG CGGCTGAGCG AACATGCCAG CGCGCAAGAC AGCAAAGCCT ATCGCCGCAG CGTGGCAGCC TTTGCCGCTT TGGGCTATGC CTGGGTGGTC GGCTGCCTGC TGCTTGCGGC TGCCATTCTG GCGTGGCTAG GCAGCTCGCT GCTGCGGGGC CAGTTCAAGG GCGCCTACAT CTGGCTGCTG CTGGCCGCGG GCGGCCTGCT TTGGACCAGC CTGCGTGCCT TGTGGTGTCG GCTCGACGAG CCGCAAGGCG TGGCGCTGTC GCCCGCCGAT GCGCCGGCCC TGTTCGAGGC GCTGGAGCGC ATCCGCAGGA AGATCAAGGG CCCGACTATC CACCGCGTGC TGCTGGACGG GGACTTCAAC GCCAGCATCA GCCAGTATCC GCGCTATGGC CTGTTCGGCG GTGCCGTCAA CTACCTGACC ATTGGCCTGC CCCTGCTGCT GGCAGTGGAC CGGCCGCGCT TTCTTGCCGT GCTGGCTCAC GAGTACGGCC ACTTGCGCGG CGATCACGGC CGCTTCGCGG CCTGGATTTA TCGCACCCGC CTGAGCTGGG CCAAGCTCAG CCACGGCCTG CGCAACGACG AGGGGCCGGT GGCCGCGGCC ACCCAGGCCT TTCTGCGCTG GTATTTCCCG CGCTTTTCGG CCAAGACCTT TGCGCTGGCG CGCCAGGACG AGTACGAGGC TGACCGCATT TCCGGCAAGC TGCTGGGTAA AGAAGTCGCC GCCGCCGCGC TGACCGAAAT CGCCATCAAG AGCGCCTGGC TGGGTCGCGA GTTCTGGTCG GGCCACTGGA GCGCCGCCGC AGCCAGCGCG CTGCCCGTCG GGCCGTATGC TGCCATGCGC AAACTGCTGG CCTTGGCGCC GCCAGACGAC TTCGCCCGCG AGACCTTGCG GCAGACCCTG CGGCAGATCA GCGACGTCGA CGACACGCAC CCGGTACTGC GCGACCGCCT GGAGGCGCTG GACGCGAGCA AGGGCTTGCC TGCCTGGTCG TCCAGGCCTG CGCTGGATCT GCTAGGCACC AGCGGCGCCA AATGGATCGC CCATTTCGAC AAGCAATGGT GCAAGGACAA CGCCACTGAC TGGAAGCAGC ACCATGCCTA CCTGGGCCGG GTGCGGGCCC GCGCCGACGC CCTGATGGCC AGCGCCGTGC GCAACAACGC CGGCGAAATG GTCGAGCTGG GCGACCTGCA AAGACGCCTC AATGCGCGCG CCGATGTGCG GAGCCACTAT GAACGGGCCT TGCAGATCAC GCCTGGCCAT GCCGGCGGCT TGCGCGGCCT GGTGCAATGC CTGCCGGCCG CTGAGCATGC CCGGCGCCTG GACTGCCTGG GCCAGCTGTT CGATCACAGT CTGCCCAGCC GCTGGTGGGC CTGCCGGGCG GCGGTGGCCG AACTGGAAAA GCCCGCTGCC GACGGCAGCC TCGATGACAA GGCGCTCAAG CTCTGGCGCG AGCGGCTCAA GCAGGCCGAG GAAGCCGAAG GCCGCGCCTG GGAGGAACTG ACGAACACGC CGCTTTTCCA GTCGATCAGC CGCCACGACC TGAACGAGTT CGAAAGGGGC GAGATCCAGG CGGGTATGGC GCGTTGCAAA CCCGTGGCCA GGGCCTGGTT GGTGCGCAAG AACTTGCGCG AGTTTCCCTA CCGGCGCTGT TACCTCGTCT TCGTGGAACT GCCGGGCCTG GACGACGAAG AGCGGTATGA CCTGTGCCGC GAGCTCGAGC GTTCACTGGA TCTGCCCGGA CCGGCCCTGG CCCTGTGGGC TGGTTATTCG CCCACGCTGG GTGACATCGA GCGAGACGCC TTCGAACCCA TCTACATCCG CACCCCGGCC TGA
|
Protein sequence | MDRADFIHLV RLSEHASAQD SKAYRRSVAA FAALGYAWVV GCLLLAAAIL AWLGSSLLRG QFKGAYIWLL LAAGGLLWTS LRALWCRLDE PQGVALSPAD APALFEALER IRRKIKGPTI HRVLLDGDFN ASISQYPRYG LFGGAVNYLT IGLPLLLAVD RPRFLAVLAH EYGHLRGDHG RFAAWIYRTR LSWAKLSHGL RNDEGPVAAA TQAFLRWYFP RFSAKTFALA RQDEYEADRI SGKLLGKEVA AAALTEIAIK SAWLGREFWS GHWSAAAASA LPVGPYAAMR KLLALAPPDD FARETLRQTL RQISDVDDTH PVLRDRLEAL DASKGLPAWS SRPALDLLGT SGAKWIAHFD KQWCKDNATD WKQHHAYLGR VRARADALMA SAVRNNAGEM VELGDLQRRL NARADVRSHY ERALQITPGH AGGLRGLVQC LPAAEHARRL DCLGQLFDHS LPSRWWACRA AVAELEKPAA DGSLDDKALK LWRERLKQAE EAEGRAWEEL TNTPLFQSIS RHDLNEFERG EIQAGMARCK PVARAWLVRK NLREFPYRRC YLVFVELPGL DDEERYDLCR ELERSLDLPG PALALWAGYS PTLGDIERDA FEPIYIRTPA
|
| |