Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3530 |
Symbol | |
ID | 4013793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3732879 |
End bp | 3733622 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637943192 |
Product | GntR family transcriptional regulator |
Protein accession | YP_550336 |
Protein GI | 91789384 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0642963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.159703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA ACGTCCACGG CAACACGGTA GACCTGCTAG GCGAAGCCAT CGTCGCGGGC CGCTATGCGG TCGGCCAGTC GATCCCGCCC GAGCCGGTGT TGTGCGAGCA GCTCGGTGTC AGCCGCACGG TGGTGCGCGA GTCCGTCAAG TCGCTGGTGG CCAAGGGGCT GATCCATACC GGCCCCAAAG TCGGCACGCA TGTGTTGCCG TCCGATCAGT GGAACTGGTT CGACCCTGAC GTGATTGCCT GGCAGTCGCG CGCTGGCCTG TCACCCGAGT TCATCCGCGA CCTGCAGGAC CTGCGCCTGG TGGTTGAGCC GGCGGCCGTG AAGCTGGCGG CGACCCGCGC TACCGATGCC GACATTGCTG AAATCGAAGA GGCCTATGCC GGCATGCATC GCGCCGTGAT GGGCGGCGGC GACTATGTGA CCAGCGACCT GCGTTTTCAC CAGGGGCTGT TGCGCGCCTC GCACAACCGC ATGCTGGTGC AGATGAGCAA GGCGCTGGGC GCGCTGCTGC GCACCAGTTT CGAAATCTCC ACGAGCAAGA AGGACGGTCC GCGCAGCTCG CTGCCCTTGC ACCGTGCCGT GCTCGATGCC GTGGTGGCGC GCGATCCGGT CAAGGCCGAG CGCGCCGTGC TGGTGTTGAT CGAAGGGGCG CACAAGGACA TCGAGCAGGT GCTCGGTTCC CGCCGCCGCC TGCCCCGCGT CCACCGACCT GCTTTGCCGT TGAAGGCGGC CTGA
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Protein sequence | MIKNVHGNTV DLLGEAIVAG RYAVGQSIPP EPVLCEQLGV SRTVVRESVK SLVAKGLIHT GPKVGTHVLP SDQWNWFDPD VIAWQSRAGL SPEFIRDLQD LRLVVEPAAV KLAATRATDA DIAEIEEAYA GMHRAVMGGG DYVTSDLRFH QGLLRASHNR MLVQMSKALG ALLRTSFEIS TSKKDGPRSS LPLHRAVLDA VVARDPVKAE RAVLVLIEGA HKDIEQVLGS RRRLPRVHRP ALPLKAA
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