| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3520 |
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| Symbol | |
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| ID | 4013822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3723231 |
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| End bp | 3724970 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943182 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_550326 |
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| Protein GI | 91789374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.119632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTG AAGAATTGAA ATTGGCTCCG GCCATTCTTA AAGCCGTGCT TGAGCAGGGT
TACGACACCC CCACGCCTAT CCAGGCCCAG GCGATTCCCG CCGTGCTGGC CGGCAGCGAC
CTGCTCGGCG GCGCCCAGAC GGGCACCGGC AAGACCGCCG CGTTCACCCT GCCCATGCTG
CAGCGCCTGT CTACCGAACC CCGGCTGACC AACCGACGCG GCGTCAACGC CGTGCGCGCC
CTCATCATGA CGCCGACCCG CGAGCTGGCC GCGCAGGTTG AAGAAAGCGT ACGCACCTAC
GGCAAATACC TGGATCTCAC CTCCATGGTG ATGTTCGGCG GTGTCGGCAT GGGGGCGCAA
ATCGACAAGC TGCGCCGCGG CGTGGACATC CTGGTGGCCA CCCCCGGCCG CCTGCTCGAC
CATGCAGGCC AGGGCACGCT GGACCTGAGC CAGGTACAGA TCCTGGTGCT CGACGAAGCC
GACCGCATGC TCGACATGGG CTTCATCCAC GACATCAAGA AGGTGCTGGC GCTGGTGCCC
AAGCACAAGC AGTCGCTGCT GTTCAGCGCC ACCTTCAGCG ACGAGATCCG CGAACTGGCC
AATGGCCTGC TGCGTGACCC CCTGCACATT CAGGTGACGC CGCGCAACAC CACCGTGCAG
CGCATCACGC AGACGATCCA TCCGGTGGGC CGCAGCAAAA AGAAGGCGCT GCTGACCCAC
ATCATCAACG AGCACAACTG GAGCCAGGTG CTGGTGTTCA CGCGCACCAA GTTTGGCGCC
AACAACGTGG CCGAGCACCT GACCAAAAAC GGCATTGAAG CCATGGCCCT GCACGGCAAC
AAGAGCCAGA CCGCCCGCAC CCAGGCGCTG CAGGGCTTCA AGGACGGCAC GATTCGCGCA
CTGGTCGCCA CGGACATCGC AGCCCGCGGC ATTGACATCG ACGAATTGCC GCACGTGGTG
AACTACGAGA TTCCCAACGT CAGTGAAGAC TATGTGCACC GCATCGGCCG CACCGGCCGC
GCCGGCAACA GCGGCGAGGC GGTGAGCCTG GTGTGTCTGG ATGAAGAAGG CTTTATGCAG
GACATCGAGC GCTTCACCAA GCAGAACATT GAAAAAGTGC TGGTGCCCGG CTTTGAAGCC
GAGCCCGGCG AAAGAGCCGA GCCGCTGGCC ATGGGCCGCC AGACCATCTG GGGCGGCCTC
GGTAAACCCC CAAGCCGTGA CGTGATGCAG GCCGCCGCGA AAGCAGCGCG CAGCGAAATG
ATGCAGCGTA TCCGTGACAC CAAAGGCGCC CAGCCTGCGC GCGGCGCGAG TGGCGGCGGT
AATGGTGGCA ATGGCGGCAA CGGAGGCGGC CGCGGACGCG GCCCCGCCGG TGGCGGCAAT
GGCAGTGGTA ATGGCAGTGG ACGCGGCCCG CGCACCCCCA ATCCGGGTCA GCCGCGCCAG
AATTCCGGCT ATTCGCAAGG CGGCCAGCCT GCCCAGCCGA GACATGCTCA GGCGCGGCAA
CGCGACGAGC AACCCCGTGC GCCAAGGAAT GACTCACGCA GCGAGCCTCG CAATGACTTC
GACAACCAGC AGCCCGCCAG CCACGCCTCG TCCGGATTCC CGTCTTCCGG CCAACCCACT
GGCAACCGCA ACAACTTCCG GGGCAACCGC TCCGGCGGTG GCGGCGGCTC GGGTGGCGCT
GGTGGCCGGG GCAACGGGCC TCGTCGGCCA GGCGGTCCTG GCTCGTTTAC TGGCCGATAA
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| Protein sequence | MTFEELKLAP AILKAVLEQG YDTPTPIQAQ AIPAVLAGSD LLGGAQTGTG KTAAFTLPML
QRLSTEPRLT NRRGVNAVRA LIMTPTRELA AQVEESVRTY GKYLDLTSMV MFGGVGMGAQ
IDKLRRGVDI LVATPGRLLD HAGQGTLDLS QVQILVLDEA DRMLDMGFIH DIKKVLALVP
KHKQSLLFSA TFSDEIRELA NGLLRDPLHI QVTPRNTTVQ RITQTIHPVG RSKKKALLTH
IINEHNWSQV LVFTRTKFGA NNVAEHLTKN GIEAMALHGN KSQTARTQAL QGFKDGTIRA
LVATDIAARG IDIDELPHVV NYEIPNVSED YVHRIGRTGR AGNSGEAVSL VCLDEEGFMQ
DIERFTKQNI EKVLVPGFEA EPGERAEPLA MGRQTIWGGL GKPPSRDVMQ AAAKAARSEM
MQRIRDTKGA QPARGASGGG NGGNGGNGGG RGRGPAGGGN GSGNGSGRGP RTPNPGQPRQ
NSGYSQGGQP AQPRHAQARQ RDEQPRAPRN DSRSEPRNDF DNQQPASHAS SGFPSSGQPT
GNRNNFRGNR SGGGGGSGGA GGRGNGPRRP GGPGSFTGR
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