Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3515 |
Symbol | |
ID | 4013817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3716348 |
End bp | 3717649 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637943177 |
Product | mandelate racemase/muconate lactonizing enzyme |
Protein accession | YP_550321 |
Protein GI | 91789369 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000711925 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0686473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTACAA CCATCACCCG GCTCTCGGTT CGCGACATCC GCTTCCCCAC CTCGCGCTCG CTCGATGGCT CGGACGCCAT GAACGCGGCG CCCGACTATT CGGCCACCTA CGTGGTGCTG CACACCGACG CCGCGCAAAC GCTGGAAGGC CATGGGCTGA CCTTCACGAT TGGCCGCGGC AATGAAATCT GCGTGGCGGC CGTCAACTCG CTGGCTTCGT TCGTGGTGGG CCGCACGCTC GAAGACATCA CCGCCGACAT GGGCGCGTTC TGGCGCAACA TCACCAGCGG CGACAGCCAG CTGCGCTGGC TGGGCCCCGA CAAGGGCGTC ATGCACCTCG CGACGGCAGC CATCGTGAAC GCCGTCTGGG ATCTGTGGGC CAAATCGCAG GGCAAGCCGG TGTGGAAGCT GCTGACCGAC ATGAGCCCGG AGCAGCTGGT GCGCTGCCTG GACTTCCGCT TTGTCACCGA CGCGCTCACA CCCGAGGAGG CCGTGGCCCT CCTGCGCCGC CAGGCGCCAA CCAAGGCCTT GCGCGAGAAG GAAATGCTGG CGCAGGGCTA CCCGGGCTAC ACCACGTCGG CCGGCTGGCT CGGCTATTCC GAAGACAAGG TGCGCCGCCT GGCCCGCGAA GGCGTGGCTG AAGGCTGGAC GCACTTCAAG CAGAAGGTCG GCGGCAACAT CGAGGAAGAC ATCCGCCGCG CCACCATCCT GCGCGAAGAG ATAGGCTGGG ACCGCAAGCT GATGATGGAC GCCAACCAGG TGTGGGAAGT GGACGAGTCC ATCACCAACA TGCGGCGCCT GGCCGCCTTC GAGCCCTGGT GGATCGAGGA GCCGACCAGC CCGGACGACA TCCTCGGCCA TGCGGCCATC CGCGCGCGCA TCGCACCGAT TGGCGTGGCG ACCGGCGAAC ACTGCCACAA CCGGGTGATG TTCAAGCAGT TGCTGCAGGC CAAGGCCATC GATTTCTGCC AGGTCGACGC GGCCCGCCTG GGTGGCCTGA ACGAAGTCCT GCTGGTGGTG CTGATGGCTG CCAAGTTTGG CGTGCCGGTG TGTCCGCATG CCGGCGGCGT GGGCCTGTGC GAGTACGTGC AGAACGTGTC GCTGTTCGAT TACATCGCAG TCTCGGGCTC GCTGGAGAAC CGTGTGCTGG AGTACGTGGA CCACCTGCAT GAGCACTTCA TCGACCCGGT GGTCATCCGC AAAGGCCGCT ACATGCCGCC GCAACGACCG GGCTACAGCA TCGAGATGCA TGCCGCGACC CTCAAGGAGT TCGAGTTCCC GAACGGCTCC GCCTGGGCCT GA
|
Protein sequence | MTTTITRLSV RDIRFPTSRS LDGSDAMNAA PDYSATYVVL HTDAAQTLEG HGLTFTIGRG NEICVAAVNS LASFVVGRTL EDITADMGAF WRNITSGDSQ LRWLGPDKGV MHLATAAIVN AVWDLWAKSQ GKPVWKLLTD MSPEQLVRCL DFRFVTDALT PEEAVALLRR QAPTKALREK EMLAQGYPGY TTSAGWLGYS EDKVRRLARE GVAEGWTHFK QKVGGNIEED IRRATILREE IGWDRKLMMD ANQVWEVDES ITNMRRLAAF EPWWIEEPTS PDDILGHAAI RARIAPIGVA TGEHCHNRVM FKQLLQAKAI DFCQVDAARL GGLNEVLLVV LMAAKFGVPV CPHAGGVGLC EYVQNVSLFD YIAVSGSLEN RVLEYVDHLH EHFIDPVVIR KGRYMPPQRP GYSIEMHAAT LKEFEFPNGS AWA
|
| |