Gene Bpro_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3515 
Symbol 
ID4013817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3716348 
End bp3717649 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID637943177 
Productmandelate racemase/muconate lactonizing enzyme 
Protein accessionYP_550321 
Protein GI91789369 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000711925 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0686473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACAA CCATCACCCG GCTCTCGGTT CGCGACATCC GCTTCCCCAC CTCGCGCTCG 
CTCGATGGCT CGGACGCCAT GAACGCGGCG CCCGACTATT CGGCCACCTA CGTGGTGCTG
CACACCGACG CCGCGCAAAC GCTGGAAGGC CATGGGCTGA CCTTCACGAT TGGCCGCGGC
AATGAAATCT GCGTGGCGGC CGTCAACTCG CTGGCTTCGT TCGTGGTGGG CCGCACGCTC
GAAGACATCA CCGCCGACAT GGGCGCGTTC TGGCGCAACA TCACCAGCGG CGACAGCCAG
CTGCGCTGGC TGGGCCCCGA CAAGGGCGTC ATGCACCTCG CGACGGCAGC CATCGTGAAC
GCCGTCTGGG ATCTGTGGGC CAAATCGCAG GGCAAGCCGG TGTGGAAGCT GCTGACCGAC
ATGAGCCCGG AGCAGCTGGT GCGCTGCCTG GACTTCCGCT TTGTCACCGA CGCGCTCACA
CCCGAGGAGG CCGTGGCCCT CCTGCGCCGC CAGGCGCCAA CCAAGGCCTT GCGCGAGAAG
GAAATGCTGG CGCAGGGCTA CCCGGGCTAC ACCACGTCGG CCGGCTGGCT CGGCTATTCC
GAAGACAAGG TGCGCCGCCT GGCCCGCGAA GGCGTGGCTG AAGGCTGGAC GCACTTCAAG
CAGAAGGTCG GCGGCAACAT CGAGGAAGAC ATCCGCCGCG CCACCATCCT GCGCGAAGAG
ATAGGCTGGG ACCGCAAGCT GATGATGGAC GCCAACCAGG TGTGGGAAGT GGACGAGTCC
ATCACCAACA TGCGGCGCCT GGCCGCCTTC GAGCCCTGGT GGATCGAGGA GCCGACCAGC
CCGGACGACA TCCTCGGCCA TGCGGCCATC CGCGCGCGCA TCGCACCGAT TGGCGTGGCG
ACCGGCGAAC ACTGCCACAA CCGGGTGATG TTCAAGCAGT TGCTGCAGGC CAAGGCCATC
GATTTCTGCC AGGTCGACGC GGCCCGCCTG GGTGGCCTGA ACGAAGTCCT GCTGGTGGTG
CTGATGGCTG CCAAGTTTGG CGTGCCGGTG TGTCCGCATG CCGGCGGCGT GGGCCTGTGC
GAGTACGTGC AGAACGTGTC GCTGTTCGAT TACATCGCAG TCTCGGGCTC GCTGGAGAAC
CGTGTGCTGG AGTACGTGGA CCACCTGCAT GAGCACTTCA TCGACCCGGT GGTCATCCGC
AAAGGCCGCT ACATGCCGCC GCAACGACCG GGCTACAGCA TCGAGATGCA TGCCGCGACC
CTCAAGGAGT TCGAGTTCCC GAACGGCTCC GCCTGGGCCT GA
 
Protein sequence
MTTTITRLSV RDIRFPTSRS LDGSDAMNAA PDYSATYVVL HTDAAQTLEG HGLTFTIGRG 
NEICVAAVNS LASFVVGRTL EDITADMGAF WRNITSGDSQ LRWLGPDKGV MHLATAAIVN
AVWDLWAKSQ GKPVWKLLTD MSPEQLVRCL DFRFVTDALT PEEAVALLRR QAPTKALREK
EMLAQGYPGY TTSAGWLGYS EDKVRRLARE GVAEGWTHFK QKVGGNIEED IRRATILREE
IGWDRKLMMD ANQVWEVDES ITNMRRLAAF EPWWIEEPTS PDDILGHAAI RARIAPIGVA
TGEHCHNRVM FKQLLQAKAI DFCQVDAARL GGLNEVLLVV LMAAKFGVPV CPHAGGVGLC
EYVQNVSLFD YIAVSGSLEN RVLEYVDHLH EHFIDPVVIR KGRYMPPQRP GYSIEMHAAT
LKEFEFPNGS AWA