| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3508 |
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| Symbol | |
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| ID | 4013810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3708586 |
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| End bp | 3710250 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637943170 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_550314 |
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| Protein GI | 91789362 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.254838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCTC GTGCCAAGAC AGTAAAGGAG CGCAATGGCG CGCCAATAAC GCCACCAGGA
GAGCAATCGG TTTTCCTGCA AAACATCCTC GAATCGTCGA CCGAGTATTC GATCATCGGC
AAGGATCTCA GCGGCAAGAT CCAGCTCTGG AACGCCGGTG CACGGCGCCT CTATGGCTAC
GAGCCGGAAG AAGTCATTGG CAAGGCCAAC TCGTCCATGC TCCATACGCC GGAGGACCTT
GCCGCCGGCA AGCCGGCCCA GATCATGGAC GCCGCCTTGC AAGCCGGCAA ATGGGAAGGT
ACCCTCACGC GATGCCGCAA TAACGGCGAG CGATTCACCG CGCGCGTCGT CATCACGCCA
CGCCGCGATG CCACCGGCAA GCCCATCGGC TTCCTGCTGA TCTCGAAAGA CATCTCGGAT
GAAATCCGCC TGACGGAAGA ACTCAAGGCC ACGCAGTTCT ACGCGCGCAG CCTGATCGAG
GCCTCGCTCG ACCCGCTGGT CACCATCAGC CCTGAAGGCA AGATCACCGA TGTCAATGAA
GGCTCGATCA AGGTCACCGG CGTGCCGCGC GAGAAGTTGA TCGGAGCCGA CTTCTCCGAC
TACTTCACCG AGCCGGAAAA GGCCCGCGAA GGCTACCAGC AGGTTTTTTC CAAGGGTGCC
GTCACCGACT ACCCCCTGAC GATCCGGCAC AAGGACGGGC GCCTCACCGA CGTGCTCTAC
AACGCCTCGG TGTACAAGGA CGCGCGCGGA AATGTGCTGG GCGTGTTTGC GGCAGCGCGC
GATGTGACGG AAAGCCGCAG GGCGGAACAG AGATTCCGGA CCCTCATCGA GTCGGCGCCG
GATGCGATGG TGCTTGCCAA CCGGGAAGGA ATCATCCTGC TGGTGAACAA CCAGACCGAA
AGCCTGTTCG GCTATGCGCG CGAAGAGATG CTTGGGAAGT CGGTTGATCT CTTCGTTCCC
AGCCGCTACC GCAGCGCCCA TCCTGGAAAT CGGGCGAAGT TCTTCGGCGA ACCGCGCCTG
CGTCCCATGG GCGCGGGCCT GGAACTCTGG GGTGCTCGCA AGGACGGAAG CGAGTTCCCG
ATCGAGATCA GTCTCAGCCC GATCGAAAGC CCCCAGGGTT TGTCTGTCGC GGCGACGATT
CGGGATGTCA CGGTGCAAAA GACATCCTCC CAATATGCCC GCAGCCTGAT CGAGGCTTCG
CTCGATCCAC TGGTCACCAT CAGCACGGAA GGCAAGATCA CCGACGTCAA TGAGGGATCG
ATCAAGGTCA CCGGCATCTC GCGCGACAAG CTGATCGGGA CCGACTTCTC CGACTACTTT
ACCGAACCGA AAAAAGCGCG CGAAGGCTAC CAGCAGGTGT TCGCCGAGGG CTTCGTGACC
GACTACCCGC TGACAATCCG ACACAAGGAC GGGCGCCTCA CCGACGTGCT CTACAACGCC
TCAGTCTACA AGGACACACT CGGCAACGTG TTGGGCGTGT TCGCCGCCGC GCGTGACGTG
ACGGCGCAGA AGAGGGCCGA GGCCGAGGTC GCCGAACAGC GCAACAAGGA GTTGGAGCGG
CTGGCGGAAC TGGAGCGTTT CCAGCGGCTT ACCGTCGGAC GGGAGCTCAA GATGATCGAG
CTCAAGAAGG AGATTGAAGA ACTCAAGAAA ACCGGGGCCA GGTGA
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| Protein sequence | MDARAKTVKE RNGAPITPPG EQSVFLQNIL ESSTEYSIIG KDLSGKIQLW NAGARRLYGY
EPEEVIGKAN SSMLHTPEDL AAGKPAQIMD AALQAGKWEG TLTRCRNNGE RFTARVVITP
RRDATGKPIG FLLISKDISD EIRLTEELKA TQFYARSLIE ASLDPLVTIS PEGKITDVNE
GSIKVTGVPR EKLIGADFSD YFTEPEKARE GYQQVFSKGA VTDYPLTIRH KDGRLTDVLY
NASVYKDARG NVLGVFAAAR DVTESRRAEQ RFRTLIESAP DAMVLANREG IILLVNNQTE
SLFGYAREEM LGKSVDLFVP SRYRSAHPGN RAKFFGEPRL RPMGAGLELW GARKDGSEFP
IEISLSPIES PQGLSVAATI RDVTVQKTSS QYARSLIEAS LDPLVTISTE GKITDVNEGS
IKVTGISRDK LIGTDFSDYF TEPKKAREGY QQVFAEGFVT DYPLTIRHKD GRLTDVLYNA
SVYKDTLGNV LGVFAAARDV TAQKRAEAEV AEQRNKELER LAELERFQRL TVGRELKMIE
LKKEIEELKK TGAR
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