Gene Bpro_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3458 
Symbol 
ID4013877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3663110 
End bp3663760 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID637943121 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_550265 
Protein GI91789313 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.898737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAA AGCCTCCTGA CCGGCCAGCT CCATCGGGCT GGAACCGCCG TGCCGTTGCG 
CTGGCGCTGG TTGCCTCGCC TGTTGTGTGG ACAGGCGCCC GCGCCCAGCC GGCTCGTCCG
CGGCGCGCAA CACCCAGCCA GACCGAAGGC CCGTTCTACC CGCTCACCCT GCCGCAGGAC
GCAGACTTTG ACCTGCTGCG CAACGGCGCG CTGAATTACA CCCAGGGGCA GCCAAGCTGG
CTCGAAGGCT CGGTTACCGA CCTGAACGGC AAGCCCTTGC GGGGCGCCCA GGTTGAAATC
TGGCAATGCG ACCACGCCGG CCACTACGAT CACCCCGGCG ACGGCGGCCG TATCGACAGG
GCGTTTCAGG GTTTCGGCCG CGTGACGGTG AATGCACAGG GCGAGTACCG CTTTCGCACC
ATTCGTCCGG TGGCTTACGG GAGCCGCACG CCGCACATCC ATGTGAAGGT CAAGCTCGGT
GGCCGCGAGT TGCTGACGAC GCAACTCTAT GTGGCCGGTG AGCCGCTGAA CCAGCGTGAT
TTTTTATGGC GCAACCTGCG GGACGATGAC GCCCGCGCAG CACTCACCGT GCCGTTCACC
CCTGTGCCGG ACGGGCTGCG GGCGCAGTTC CCGCTGGTGG TGGAGGTCTG A
 
Protein sequence
MRPKPPDRPA PSGWNRRAVA LALVASPVVW TGARAQPARP RRATPSQTEG PFYPLTLPQD 
ADFDLLRNGA LNYTQGQPSW LEGSVTDLNG KPLRGAQVEI WQCDHAGHYD HPGDGGRIDR
AFQGFGRVTV NAQGEYRFRT IRPVAYGSRT PHIHVKVKLG GRELLTTQLY VAGEPLNQRD
FLWRNLRDDD ARAALTVPFT PVPDGLRAQF PLVVEV