| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3457 |
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| Symbol | |
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| ID | 4013876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3662375 |
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| End bp | 3663046 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943120 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_550264 |
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| Protein GI | 91789312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA CCGACTCCCT GTCTGCCCCA CTGGAAATCG TCCACACCGA CGATCTTTTT
CTGGTGCTCC GCAAACCCAG CGGCCTGCTC GCGGTACCGG GGCGCGGCGA GGACAAGCAG
GACTGCCTGA GCACGCGCGT GCAACAGCAG CATCCCGAGG CTTTGGTGGT GCACCGGCTG
GACATGGGAA CCTCTGGCCT GGTGGTCATG GCGCGCAGCC GCGAAGCCCA GCGCGCCCTC
AGCAAGGCCT TTGCAGAACG CGCCGTGCAC AAGCGCTATG TAGCGGTGGT CGACGGCCTG
ATGGCAGCGC CTGCGGATTC GCCCGACGGC TGGGGCCGGA TCGATTTACC CATCATCGTG
GACTGGGCCC GGCGGCCCTT GCGGGTGATA GACGCCGAAC GCGGAAAACC CAGTGTGACG
CGCTGGCAGA TCCAGCATCA TGACCGGCAG CGCAATACCA CCCGCCTGCT TCTTGAGCCT
GTGACGGGCC GCTCGCATCA GCTGCGCGTC CATCTGCAGG CGATCGGGCA CCCGATCGTA
GGCGACGCGC TGTATGCGAC GCCCGCCGTG GCGGCCGGTG CCGGCCGGCT TTTACTGCAC
GCCTGCCGGC TTGCTTTTGC CCATCCGCTG GGTGGACAAT GGATGCAATT TGAAAGCCCG
CCGCCCTTCT GA
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| Protein sequence | MPNTDSLSAP LEIVHTDDLF LVLRKPSGLL AVPGRGEDKQ DCLSTRVQQQ HPEALVVHRL
DMGTSGLVVM ARSREAQRAL SKAFAERAVH KRYVAVVDGL MAAPADSPDG WGRIDLPIIV
DWARRPLRVI DAERGKPSVT RWQIQHHDRQ RNTTRLLLEP VTGRSHQLRV HLQAIGHPIV
GDALYATPAV AAGAGRLLLH ACRLAFAHPL GGQWMQFESP PPF
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