Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3453 |
Symbol | |
ID | 4013872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3658156 |
End bp | 3659127 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637943116 |
Product | ABC transporter related |
Protein accession | YP_550260 |
Protein GI | 91789308 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.155551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG AGGTCGATCC ATCTCCGCTG ATTGACGTGC GGGGCCTGAC CAAGCGCTAC GGCAACCGGG TGGTGGTCGA CAACTTCGAC ATGCGCGTTC CCAAGGGCCG CATCTACGGC TTCCTCGGCC CCAACGGCAG CGGCAAAACC ACCACCATCC GCATGCTGTG CGGCCTGCTC ACGCCCGACG CGGGCGAAGG CACCTGCATG GGCTACAACA TCCGCACCCA GGCCGCGCTG ATCAAGCGCG AGGTAGGCTA TATGACGCAG CGCTTTGGCC TGTACGAAGA CCTGACGATC GCGGAAAACC TCGATTTCAT TGCGCGCGTC TACGCCGTGG AGGACCGCCC CCGCAAGGTA CGCGAAACGC TGGAGCGCCT GGGCCTGGCC ACGCGCGGCG ACCAGCTGGC CGGCGCACTG TCGGGCGGCT GGAAGCAGCG GCTGGCGCTG GCCGCCTGCC TGATCCACAG CCCCCGGCTG CTGCTGCTGG ACGAGCCCAC CGCAGGCGTG GACCCGGCCG CCCGCCGCGA CTTCTGGGAT CAGATCCACG ATCTGGCCGC CGCCGGCCTG ACCGTGCTGG TCTCCACCCA TTACATGGAC GAGGCCGAGC GCTGCCATGA GCTGACCTAC ATCGCCTACG GCAAGCTGCT CACGCGCGGC ACCGTGGCCG AGGTGATTGC CGGCGCCGGG CTGGTGACCT GGGCCATTTC CGGCGCCAAC CTGATCGAGG TGGCGCACCG CCTGCGCAAA GCCACGGATA TTCGCACGGT AGCGCCCTTC GGCTCCACGC TGCACGTGAG CGCCTCCAGC ACCCAGGCTA TCGAGGATGC GCTGGCCGCG CTGCCCTTTG AAGGGCTGGC GGTCGAGGCT ATCGAGCCCA GCCTCGAGGA CGTGTTCATC GCGCTGATGC AGGACGCGCA GGACAACTAT TCCGTTGAAA AAACAGGAGA AAAAACAGGA GCAAAGGCAT GA
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Protein sequence | MSAEVDPSPL IDVRGLTKRY GNRVVVDNFD MRVPKGRIYG FLGPNGSGKT TTIRMLCGLL TPDAGEGTCM GYNIRTQAAL IKREVGYMTQ RFGLYEDLTI AENLDFIARV YAVEDRPRKV RETLERLGLA TRGDQLAGAL SGGWKQRLAL AACLIHSPRL LLLDEPTAGV DPAARRDFWD QIHDLAAAGL TVLVSTHYMD EAERCHELTY IAYGKLLTRG TVAEVIAGAG LVTWAISGAN LIEVAHRLRK ATDIRTVAPF GSTLHVSASS TQAIEDALAA LPFEGLAVEA IEPSLEDVFI ALMQDAQDNY SVEKTGEKTG AKA
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