| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3393 |
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| Symbol | |
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| ID | 4013929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3586484 |
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| End bp | 3589312 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637943056 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_550200 |
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| Protein GI | 91789248 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR00517] acyl carrier protein
[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0997952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.240157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAG ACTCGCCTTC CCGCGCAGTG TCCGACGAGG CTGTGTTGCG GATCGTGCGG
GAAGTCTTGA CCGAACTCCA CCCGGGCCGC AAGGACACGG ACCTGGTGAC GCTGGACAGT
TCGCTGGAGG AAGACCTTGG CCTGGACAGC CTGGCGCGCG TGGAGTTGTT GATGCGCCTC
GAACGCGCGT TCGGCGTGCG CCCGCCGGAG CATATGCTGA GCACGGCCGA AGCGCCTCGA
GACCTGCTGC GTGCGCTGCT TGCCGCACGG GGCTCACCCC AGGCGCCAGT GCAGCAGGCA
CGGCGGCTTG CGGTGCCCGA ACGCGTCTCG CAAGCGCCGC ACGCGGCGGC GACCCTGCAG
GAGGTGCTCG ACTGGCACGT GCGGGCTCAT CCGCAGCGCG AGCACATTGC GATCGACAAC
GGCGACAGCG CCGCACCGAC GCGCCTGAGC TACGCCGACT TGCAGCAGGG CGCCGCTGGC
GTCGCTGCGG GGCTGCTGGA TCGCGGCTTT CAGCCGGGTC AGCCGGTGGC GCTCATGCTG
CCGACCGGCC CGGAGTACTT CTTCAGCTTC GCCGGCATTC TGCTGGCCGG CGGCATTCCG
GTACCAATCT ACCCGCCAGC GCGGGCGGCG CAGATCGAGG AGCACCTGCA GCGTCACGTC
GGCATCCTCA CCAATGCGCT GGCCACGGCG CTGATCACTG TGCCGCGGGC CAGGGTGCTG
GCGACGCTGC TCAAGTCCCA GGTGCCGTCG CTGCGCATGG TCTGCACGGT GGAAGAACTG
TCCGCGTCCA CCGCCTCCCC GGAACGCGTC ACCGCCCATG CCAACGATAT TGCCCTGCTG
CAGTACACCT CCGGCAGTAC CAGCAGTCCC AAGGGGGTGG TCCTGACGCA CGCCAACCTG
CTGGCCAACC TGCGGGCCAT GGGGCAGGCC CTGCAAGTCA GCTCCGAAGA CGTCTTCGTC
TCGTGGCTGC CGCTGTACCA CGACATGGGG CTGATCGGGG CTTGGCTGGG CAGCCTGTAT
TACGCATACC CGCTGGTGGT GATGTCGCCG CTGACATTTC TCGCGCGACC CGAGCGCTGG
CTGTGGGCCG TGCACCGGCA CCGCGGCACG CTGTCCGGCG GGCCCAACTT CGGCTACGAG
CTGTGCCTGC GCAAGCTCGA CGAGGCCGCG CTGGAGGGGC TCGACCTGTC CAGCTGGCGC
TTTGCGTTCA ACGGCGCCGA GCCGGTCAGC GCGACGACCA TGCAGGAGTT TCAGCAACGC
TTCGCCTGCT ACGGGCTGCG GCCGCAAGCG CTGGCGCCGG TGTACGGACT GGCGGAGGCA
ACGCTGGGCC TGACCTTCCC GCCGCAGGGA CGGGGTCTGC TGGTCGACCG CATCGATACG
CAAGCGTTCT CGCACTCGGG CCGCGCACTG CCCGCGGCGA GCAGCACGTC TGGCGTGCGG
CTGGTCGTAG CGTGCGGACG GCCGCTGCCG GGCCATGAGG TCCGCCTGGT CGACGCGACG
GGATGTGAGG TGGCGGAACG CCAGGAAGGG CGTCTGCTGT TCAAGGGTCC GTCGGCCACC
AGCGGCTACT TCCGCAACCC GAAAGAGACG CGCCGGCTGT TTGATGGCGA GTGGCTGGAC
TCGGGCGACT ACGCCTACAT GGCACAAGGC GACGTCTACA TCACCGGGCG GGCCAAGGAC
GTGATCATTC GGGGCGGCCG TCAGATCTAC CCGTACGACC TGGAGGAGGC CGTCGGCGCG
ATTCCCTCTG TCCGCAAGGG CTGCGTCGCC GTGTTCGGTA GCCCGGACCC CATGACACGC
AGCGAGCGGG TCGTTGTCAT GGCGGAAACC CGTGGCCTGC CGCCCGAGGC GCTGGCGCAG
CTGCGCCGCC AGATCAACAG CGCCGCGGTC GGCGTGCTCG GTGCGCCGCC GGACGACGTG
GTCCTGGTGC CGCCGCACAC GGTCTTGAAG ACCTCCAGCG GCAAGATTCG TCGCGCGGCC
AGCCGCGAAC TGTACGAGAC CGGAGGCGCT TCGGCCACGC AGCCGGCGCC ATGGCAGCAG
ATCGCGCGCT TTGCCTGGCA GGCGAGACTG CCGCAACTGC GGCGTGCCGG GCGCGTCGTA
GCGGAGATAG CCTACGCTGG CTATGTCTGG CTGCTGTTCT GGCTGCTTGC GCCTATTACG
TGGGCGCTGA CCGCCGTGCT GCCCAAGCTG TCCTGGAGCT GGGCCCTGAG TCACCATGCA
GCCCGGCTGT TCCTGCGTTT GTCCGGGCTC CCGTTTGCGG CCGAGGGGCT GGCGAATCTG
CCGCGCGAGG CAAGCTGTGT GGTGGTGGCG AACCATGCGA GCTACCTGGA TGGCATAACC
CTGGTCGCCG CACTGCCGCG CCATGTCCGC TTTGTCGCCA AGCTCGAACT GCAGAAACAG
TTCATCTCAC GGGTCTACTT GCAAGGCCTC GGCGCCATGT TTGTAGACCG CGACGACGCG
CAGCGCGGGG CGCAGGACGT CGCGCGGGTG ACGCGCAGCG TTTGCGACGA AACCGCCATG
TTGTTTTTCC CGGAAGGAAC GTTCAGGCGT GTGCCAGGCT TGTTGCCGTT CCATGCGGGC
GCGTTCTCTG CGGCAGCGCA GGCCGGCGTG CCCGTGGTGC CGGTGACGAT CCGCGGCACG
CGCTCCGTGC TGCGTGCCGG CCAGTGGTTC CCCCGCCGCG TACCGATCAG CGTGCTGGTC
AGTTCCCCGA TTCAACCCGA TGGTGACGAC TGGTCAGCGT CGATCCGGTT GCGCGACGCC
GCGCGCGCGG AAATCCTGAA GCGCTGCGCC GAGCCGGATG CCGGCGATGA AAGCCGCCTG
CCTTCGTAA
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| Protein sequence | MNVDSPSRAV SDEAVLRIVR EVLTELHPGR KDTDLVTLDS SLEEDLGLDS LARVELLMRL
ERAFGVRPPE HMLSTAEAPR DLLRALLAAR GSPQAPVQQA RRLAVPERVS QAPHAAATLQ
EVLDWHVRAH PQREHIAIDN GDSAAPTRLS YADLQQGAAG VAAGLLDRGF QPGQPVALML
PTGPEYFFSF AGILLAGGIP VPIYPPARAA QIEEHLQRHV GILTNALATA LITVPRARVL
ATLLKSQVPS LRMVCTVEEL SASTASPERV TAHANDIALL QYTSGSTSSP KGVVLTHANL
LANLRAMGQA LQVSSEDVFV SWLPLYHDMG LIGAWLGSLY YAYPLVVMSP LTFLARPERW
LWAVHRHRGT LSGGPNFGYE LCLRKLDEAA LEGLDLSSWR FAFNGAEPVS ATTMQEFQQR
FACYGLRPQA LAPVYGLAEA TLGLTFPPQG RGLLVDRIDT QAFSHSGRAL PAASSTSGVR
LVVACGRPLP GHEVRLVDAT GCEVAERQEG RLLFKGPSAT SGYFRNPKET RRLFDGEWLD
SGDYAYMAQG DVYITGRAKD VIIRGGRQIY PYDLEEAVGA IPSVRKGCVA VFGSPDPMTR
SERVVVMAET RGLPPEALAQ LRRQINSAAV GVLGAPPDDV VLVPPHTVLK TSSGKIRRAA
SRELYETGGA SATQPAPWQQ IARFAWQARL PQLRRAGRVV AEIAYAGYVW LLFWLLAPIT
WALTAVLPKL SWSWALSHHA ARLFLRLSGL PFAAEGLANL PREASCVVVA NHASYLDGIT
LVAALPRHVR FVAKLELQKQ FISRVYLQGL GAMFVDRDDA QRGAQDVARV TRSVCDETAM
LFFPEGTFRR VPGLLPFHAG AFSAAAQAGV PVVPVTIRGT RSVLRAGQWF PRRVPISVLV
SSPIQPDGDD WSASIRLRDA ARAEILKRCA EPDAGDESRL PS
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