| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3384 |
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| Symbol | |
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| ID | 4013959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3577286 |
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| End bp | 3578458 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943048 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_550192 |
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| Protein GI | 91789240 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0249016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA GAACCTTTAT CCAGGCAGCC GTGATGGCCA CCGTGGCGCT CGCCGGCGCG
CAAGCTCTCG CGCAGGACAA CAAGTTCAGG ATAGGCCTGC TCCTGCCGAT GACGGGGCCC
TTCGCTTCCA CGGGCCGGCA GATTGAAGCG GCAGCCAAGC TCTACATGGC GCAGAACGGC
GACACCGTCG CCGGCAAGAA GGTCGAGCTG ATCATCAAGG ACGACACCGG AACACCCGAC
GTCACCAAGC GCCTGGCGCA GGAAATGATC GTCAACGACA AGGTCAATGT GCTGGCCGGC
TTCGGCCTGA CGCCGCTGGC ACTGGCCACG GCCCCGCTGG CCACGCAGTC CAAAACACCG
ATGGTGGTGA TGGCGGCGGC CACCTCCAGC ATCACCCAGG CTTCGCCCTA CATCGTGCGC
ACCAGCTTCA CGCTGCCGCA GGTCACCATT GGGGTGGCCG ACTGGGCACC CAGGAACGGC
ATCAAGAAGG TCGTGAGCCT GGTGTCGGAC TATGGGCCCG GCATTGATGC CGAGCGCACC
TTCAAGGACC GCTTCACCTT CAACGGCGGC ACGGTGGTGG ACGCCGTGCG CGTGCCGCTG
CGCAACCCCG ACTTCGCGCC CTTCCTGCAG AAAGTGCGTG ATGCCAAGCC CGATGCGGTG
TTTGCCTTTG TGCCCTCCGG TGCCGGCTCG GCGCTGATGA AGCAGTTTGC CGAGCGCGGC
CTGGACAAGG CCGGCATCAA GCTGATCGCC ACCGGCGACG TGACCGATGA CGACATCCTG
AACGACATGG GCGAGGTGGC CGTGGGGGTG GTGACCTCGC ACCACTATTC GGCGGCCCAC
AAATCACCGT TGAACCAGAA GTTTGTCGAA GCCTTCGGCA AGGCCAACAA GGGACTGCGG
CCCAATTTCA TGGCCGTGGG CGGCTATGAC GGCATGCGCG TGATCTACGA AGCCCTGAAA
ACCACCAAGG GCGCCGGCGG CGGCGAGGCC TTGCTTGCTG CCATGAAGGG CCAGGTGTTC
GAGAGCCCGC GCGGCCCGAT CTTTGTCGAC GCGCAATCGC GTGACATTGT GCAAAACGTC
TACATCCGCA AGGTCGAGAA AGTCGGCGGC CAGCTCTACA ACGTCGAATT CGAAACCATC
AAGGATGTGA AAGACCCGGG CAAGGCCAGG TAA
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| Protein sequence | MNKRTFIQAA VMATVALAGA QALAQDNKFR IGLLLPMTGP FASTGRQIEA AAKLYMAQNG
DTVAGKKVEL IIKDDTGTPD VTKRLAQEMI VNDKVNVLAG FGLTPLALAT APLATQSKTP
MVVMAAATSS ITQASPYIVR TSFTLPQVTI GVADWAPRNG IKKVVSLVSD YGPGIDAERT
FKDRFTFNGG TVVDAVRVPL RNPDFAPFLQ KVRDAKPDAV FAFVPSGAGS ALMKQFAERG
LDKAGIKLIA TGDVTDDDIL NDMGEVAVGV VTSHHYSAAH KSPLNQKFVE AFGKANKGLR
PNFMAVGGYD GMRVIYEALK TTKGAGGGEA LLAAMKGQVF ESPRGPIFVD AQSRDIVQNV
YIRKVEKVGG QLYNVEFETI KDVKDPGKAR
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