| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3342 |
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| Symbol | |
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| ID | 4013995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3538900 |
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| End bp | 3539619 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637943006 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_550150 |
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| Protein GI | 91789198 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.472803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATC AGGCAGAACT CTTCAAAGGC AAGCGGGCGC TGGTCGCCGG TGCAACACAG
GGCATAGGCG CCGTGATTGC CAACCACCTC GCAGCGCTGG GCGCCGAGGT CACGGCTCTC
GGGCTGGGGC CGGGCGACGG CACGCTGGAC GCGGCGGTCG CCGTGCGGCA GGCCGATGTG
ACGTCGGCGC AGAGCCTGGA CGCGGCGCTG GCCGGCATGG ACCAGCTCGA CATCGTCTTC
AACTGCGCAG GCATCATCAA GCGCGGCGCC GAGCACGACC TGGACGTGTT CGAGCAGGTG
CTGGCCGTGA ACCTGACCGG CACCATGCGG GTCTGCACCG CGACGCGCGA GCGGCTCAAA
GCCAGTCGCG GCTGCATCGT CAACACCGCC TCCATGCTGA GCTTTTTTGG CGGCGGCCTC
GTGCCGGGCT ATGCGGCCAG CAAGGGCGGA GTGGCGCAGC TCACCAAGTC GCTGGCCATT
GCCTATGCTG CAGACGGCAT CCGTGTCAAC GCCATCGCGC CCGGCTGGAT TGCCACACCG
CTCACGCAGG CGCTGCAGGA CGACCCGGCA CGCGCCGGCC CGATCCTGGC GCGCACGCCG
CTGGGCCGCT GGGGCACGCC GGCCGATGTG GCCCAGGCCG CCATGTTCCT GTGCACGCCG
GCGGCGGCGT TCATGACCGG CGTGATCCTG CCGGTCGACG GGGGCTACCT GGTGTCCTGA
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| Protein sequence | MTYQAELFKG KRALVAGATQ GIGAVIANHL AALGAEVTAL GLGPGDGTLD AAVAVRQADV
TSAQSLDAAL AGMDQLDIVF NCAGIIKRGA EHDLDVFEQV LAVNLTGTMR VCTATRERLK
ASRGCIVNTA SMLSFFGGGL VPGYAASKGG VAQLTKSLAI AYAADGIRVN AIAPGWIATP
LTQALQDDPA RAGPILARTP LGRWGTPADV AQAAMFLCTP AAAFMTGVIL PVDGGYLVS
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