| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3236 |
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| Symbol | |
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| ID | 4014082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3424927 |
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| End bp | 3426369 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637942903 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_550048 |
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| Protein GI | 91789096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0125917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGG TAACGGCGGC CGGCCTGGTG GCTGCAAGCC TGATGGCCAC GGGCCTCACC
GGCTGCGCCG ACATGTCCGG CATCGCGCCG CAGTCCAGCC TGCGCGATGC GCCTTCGCTG
GGCCTGAACG CCGATGCGGC AGCAGGGCAG GCAGGCGTTG CCGCCGAGTG GTGGCGCGAC
TTTGGCGACG AGCAGCTCAA TGGCCTGATT GCCCAGGCGC TGCAAAGCAG CCCCAGCCTG
AAGCTTGCAC AGGCCCGCCT GGCACGGGCC CGGGCCGTGA TGGAAGTGGC GGATGCCGCC
ACTTTGCCGC AGCTCAATGG CCAGATCGAC CTGACACGGC AGCGCTACAC CGCTAACGGC
GCGGTGCCCC CACCGCTGGC GGGCGCCATC CGCGACAGCG GCACGGTTCA GCTCAACGCC
AGCTGGGAAC TTGATTTCTT TGGAAAAAAC CGAGCCGCAC TGGATGCCGC CCTGGGCAGC
GCCCATGCGG CCGAGGCCGA CGCACAGGCC GCGCGCGTGC TGCTTGCCAG CAATGTAGCC
CGCAGCTACT TTCAGCTGGC TCGCCTCCAC GAGCAGGCCT TTGTTGCGCG CCGCACGCTG
GCGCAGCGGG AAGAAACCCT CAAGCTGGTG CAGGACCGCG TGGCCGCCGG GCTCGACACC
CGGCTCGAGT TGCGCCAGAG CGAGGGCGGC CTGCCGGAGG CGCGCCTGCA ACTGGAGACG
GTGCAGGAGC AGATCGCGCT GACGCGCAAC GCACTGGCTG CCCTGGTTGG GCAAGCCGGC
AGCAGCGCCC TGGCCCAGAA TCCACCCGCA TTGGCAGCAA TCAAAAACGT TGCGTTAACG
TCCAGCATTC CGGCCGACCT GCTGGGCCGC CGGGCCGACA TTGCCGCCGC GCGCTGGCGT
GTCGAAGCTG CGTCCAAAGA TGTGGTGAAT GCGAAGACAC AGTTCTATCC CAATATCAAC
CTGGTTGCCT TCGCCGGTTT TTCCAGCATT GGCCTGGGCC GTCTGCTTGA CGCCGGCAGC
CAGCAGTGGG GCGTAGGCCC GGCGCTGCGC CTGCCGATTT TTGATGCGGG CCGGCTGCGC
GCCAACCTGC GCGGCAAGAC CGCCGACCTT GATGCCGCCG TCGAAAGCTA CAACGCCGCC
GTGATTGATG CGGTGCGTGA CGTGGCCGAC CAGGTAGCCT CATCGCAGGC CATTGGTCGT
CAGCAGGCCG AGCAGCGGTC CGCGCAGGAG GCCGCAGAGG GCGCTTACGA GATTGCCGTG
CAGCGTTACA GGGCTGGCCT GGGCAACTAC CTCAATGTGC TGACGGCCGA AACCAGTGTG
CTGACCCAGC GCCGCCTGGC GGTTGACCTG GCCGCCCGCG CGCTGGACAC GCAGGTAGCG
CTGATGCGCG CACTGGGTGG TGGTTACACG CCAACGTCGG CAACCGCTTC CCAAACGCTA
TAA
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| Protein sequence | MALVTAAGLV AASLMATGLT GCADMSGIAP QSSLRDAPSL GLNADAAAGQ AGVAAEWWRD
FGDEQLNGLI AQALQSSPSL KLAQARLARA RAVMEVADAA TLPQLNGQID LTRQRYTANG
AVPPPLAGAI RDSGTVQLNA SWELDFFGKN RAALDAALGS AHAAEADAQA ARVLLASNVA
RSYFQLARLH EQAFVARRTL AQREETLKLV QDRVAAGLDT RLELRQSEGG LPEARLQLET
VQEQIALTRN ALAALVGQAG SSALAQNPPA LAAIKNVALT SSIPADLLGR RADIAAARWR
VEAASKDVVN AKTQFYPNIN LVAFAGFSSI GLGRLLDAGS QQWGVGPALR LPIFDAGRLR
ANLRGKTADL DAAVESYNAA VIDAVRDVAD QVASSQAIGR QQAEQRSAQE AAEGAYEIAV
QRYRAGLGNY LNVLTAETSV LTQRRLAVDL AARALDTQVA LMRALGGGYT PTSATASQTL
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