| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3219 |
|---|
| Symbol | |
|---|
| ID | 4014104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3407453 |
|---|
| End bp | 3408226 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637942886 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_550031 |
|---|
| Protein GI | 91789079 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR03338] phosphonate utilization associated transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0764465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT CACCCGCCCT CTCTTCCTTC TCTCCCTTCT CTCCCCTGTC CCCTCTGCAA
ATGCTGCAGG CCAATACCCT GCCCTCACTG GTGCAGGCCG AGATCGAGCA AATGATCCTG
CGCAGCGAGC TGCCCGGAGG CGCGCGAATC AATGAAAGCG ACCTCGCCGC CCGCTTCGGC
ACCAGCCGCG GCCCGGTGCG CGAGGCACTG CGCGCGCTGG AAGAATGCGG CCTGGTGCGC
TCGGAAAAAA ACCGCGGGGT CTTCGTGCGC GAAATAACGC TGGCCGAAGC CGACGAGATC
TACGACCTGC GCGAGGTGCT GGACGACATG ATCGGACGCC GCCTCGCCGT GCAGATCACG
GCGCAGCAGC TGAAGGTGCT GAAGAACCTT CTCGCCGAGA TGGACGACGC CATGAGCCGC
CAGGACATCA AGCGCTACCA CGCGCTCAAC CTCGAGTTTC ACGATGCGCT GGTTGGTTTT
GCCGGCAACT CCCGGCTGAG CGACACCTAC CGGCGCCTGA CCAAGGAGCT GCTGCTGTTC
CGCCTGCGCG GCCTGCAGGA CGGGGGCGGC TTTGCGGTCT CCAACGCCGA GCACAAGGCC
GCCGTGCTGG CCATCGCATC ACGCGACCCT GAGCGCGCCG GCCGGACGCT GCGCGCCCAT
GCGGCCGACA GCCGGGCCCG CATGCACAAG GCTTTTGGCA GAGGCGCCAG TGAGCCAGTC
TCTCCCGCAA TTTCCCTGAA AAAACCACGG CCCATCATGG CCATCAACCC CTGA
|
|---|
| Protein sequence | MSTSPALSSF SPFSPLSPLQ MLQANTLPSL VQAEIEQMIL RSELPGGARI NESDLAARFG
TSRGPVREAL RALEECGLVR SEKNRGVFVR EITLAEADEI YDLREVLDDM IGRRLAVQIT
AQQLKVLKNL LAEMDDAMSR QDIKRYHALN LEFHDALVGF AGNSRLSDTY RRLTKELLLF
RLRGLQDGGG FAVSNAEHKA AVLAIASRDP ERAGRTLRAH AADSRARMHK AFGRGASEPV
SPAISLKKPR PIMAINP
|
|---|
| |