Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3144 |
Symbol | |
ID | 4014185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3319270 |
End bp | 3320604 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637942811 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_549956 |
Protein GI | 91789004 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0287681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCG CCGGCGCCCT GATTCCCGCC AATAGCTCAC TCGTCCGTCC CCCAGCCCGC ATCGATAACC TGGATGCCTG GTTTGCAGCA CTGACCCAGC CCTCCGCGCT GACTGAACTG GCCTCGCTGG TTGCATGCGT CCTGCTGGCC TGGCTGGTGG TACGTGTGGC CAGCCGTGCC CGGCACAGTG CTGACGAGTC ATCCATCCTC TTTGGCCGGC GCATTGTGGA CGGGGTGCTG TTCCCGCTGC TGCTTTTGTC TTTTGCCTAT GCGGCCCAGG CGCTGCTGGC GCGGATGTTT CCGCTGGCAG TCTTCAAGGT GGTCATTCCA GTGCTGCTGG CGCTGGCGCT GATTCGCCTG GGCGTCAAGG TGCTGCAGGT GGCGTTTAAA AATGCGCCGC TGGTGCGGGC GCTGGAGCGC ACGATTTCAT GGCTGGCCTG GATTGCCATG GTGCTCTGGG TCAGCGGCCT GCTGCCGGTC ATTCTTGAGG AGCTGGATGG CATCAAGTGG AAGGTCGGCA ACTCGACCCT GTCGGTGCGC ACCATGCTTG AAGGGGCGCT GACGGCCGGC GTGGTGCTGT TGATCGCGCT GTGGATTTCC TCGGCCCTGG AGGCGCGCCT GCTGCGCTCC GCCACAGGTG GCGAACTGTC CTTGCGCAAG GCGGTGAGCA ATGCCGCCCG GGTGGTGCTG ATGTTTGTGG GCCTGTTGCT GGCGCTGTCG TCGGTGGGCA TTGACCTGAC GGCACTGTCG GTGCTGGGCG GCGCGATCGG CGTGGGTGTG GGCTTTGGCC TGCAAAAACT GGCCGCCAGC TATGTGAGCG GTTTCGTGAT GCTGGCCGAG CGCAGCGTGC GTATCGGGGA CAACGTGCGT GTCGATACCT TCGAAGGCCG CATCACCGAC ATCAACGCCC GCTACACCGT CGTGCGGGCA CCATCCGGCC GCGAATCCAT CGTGCCCAAC GAGATGTTCA TCAGCAACCG CATCGAAAAT CTTTCGCTCA GTGATTTGCG CGTGCTGCAG TCCACCGTGG TGTCGGTGGG CTATGACAGC GATGTCGCGC TGGTGATGCG TTTGCTGGCC GAAGCGGCGC TCAGTCAGCC GCGCGTGCTG CGCGATCCCG AGCCTTCCGT GAACCTGACC AATTTCGGGG CCGATGGGCT GGAGTTCACG CTCAACTACT GGATGACCGA CCCCGAAAAC GGCCAGCAAA ACCTGCGCTC CAGCATCAAC CTGGAGGTGC TGAAGGCCCT GCGTGAGAAC GGTATCGAGA TTCCGTATCC GCAGCGGGTG ATCCATACGC GTGTCAGCGG TGTGGAGGGC GCCAGGACTT CCTGA
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Protein sequence | MASAGALIPA NSSLVRPPAR IDNLDAWFAA LTQPSALTEL ASLVACVLLA WLVVRVASRA RHSADESSIL FGRRIVDGVL FPLLLLSFAY AAQALLARMF PLAVFKVVIP VLLALALIRL GVKVLQVAFK NAPLVRALER TISWLAWIAM VLWVSGLLPV ILEELDGIKW KVGNSTLSVR TMLEGALTAG VVLLIALWIS SALEARLLRS ATGGELSLRK AVSNAARVVL MFVGLLLALS SVGIDLTALS VLGGAIGVGV GFGLQKLAAS YVSGFVMLAE RSVRIGDNVR VDTFEGRITD INARYTVVRA PSGRESIVPN EMFISNRIEN LSLSDLRVLQ STVVSVGYDS DVALVMRLLA EAALSQPRVL RDPEPSVNLT NFGADGLEFT LNYWMTDPEN GQQNLRSSIN LEVLKALREN GIEIPYPQRV IHTRVSGVEG ARTS
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