| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3132 |
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| Symbol | |
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| ID | 4014212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3308159 |
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| End bp | 3308827 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637942799 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_549944 |
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| Protein GI | 91788992 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.9281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0247415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGA CTGCTGTAAC CCAGTTGCTG GGGGACGCTT TACCACTGAT GCTCAAGGGC
GCGGCATGGA CGCTGCTGCT GGCCGTGGCA TCGGTTTTTT TTGGCGCCAT CATCGGCACT
TTTGTGGCCA TCACACGGTT GGCGAAGATG CCCGGCCTGG CGCGGTTTGC CGCGCTGTAT
GTCAGCTGCA TGCGCGGCAC GCCGCTGCTG GTGCAGCTGT TTGTGATTTA CTTCGGCCTG
CCCAGCATTG GCATCCAGTT CGACCCGATC ACGGCGGGCA TCCTGGGGCT GAGCCTCAAC
GTCGGCGCGT ACCTGTCGGA AACGATTCGT GGGGCGATCA ATGGCGTTGA ACACGGGCAG
TGGAATGCCG CCCGCAGCCT GGGCCTCACG CAGGCGCAAA CGCTGCGCCA TGTAATCGGG
CCGCAAGCCT TGCGCCTGGC CGTTCCCAGC CTGTCCAACA GCCTGATCAG CCTGATCAAG
GACACCTCGC TGGTCTCGGT GATTGCCGTG GGTGAACTGA TGCTGGCCAC CAAGGAAGTC
ATTGCCACCA CCTTCCAGCC CTTCCCGTTG TACCTGGCGG CGGCCGCGAT TTACTGGGCC
ATGAGCGCAT CGTTTGAAAC GCTGCAGAAA AAGCTGGAAG TGCGGCTGAA CCGGAGCTAT
TTGCGCTAG
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| Protein sequence | MDMTAVTQLL GDALPLMLKG AAWTLLLAVA SVFFGAIIGT FVAITRLAKM PGLARFAALY
VSCMRGTPLL VQLFVIYFGL PSIGIQFDPI TAGILGLSLN VGAYLSETIR GAINGVEHGQ
WNAARSLGLT QAQTLRHVIG PQALRLAVPS LSNSLISLIK DTSLVSVIAV GELMLATKEV
IATTFQPFPL YLAAAAIYWA MSASFETLQK KLEVRLNRSY LR
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