| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3131 |
|---|
| Symbol | |
|---|
| ID | 4014211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3307242 |
|---|
| End bp | 3308042 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637942798 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_549943 |
|---|
| Protein GI | 91788991 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0249016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA TGAATATCCG CAAAGCTCTC GCCTCCACAA TTCTTGTCGC CCTGGCCCTG
GGCGCCGGCA TTGCGCATGC CGCCGATTTG CTGGACACCG TGAAGCAGCG CGGCACGCTG
AAAGTGGCGC TGGAAGGCAC TTACCCGCCT TTCAACTACA AGGAAAACGA CAAGCTCGCC
GGTTTTGAAG TGGAGCTTGC CAATGCGCTG GCGCAAAAGC TCGGCGTCAA AGCCGAATTC
ACCACCAGCG AGTGGAGCGC CATCCTCGCA GGCCTGCAAG CCGGCAAATA CGATGTGGTC
ATCAACCAGG TCGGCATCAC CGACAAGCGC AAGGAAACCT TTGATTTTTC CGAGCCCTAC
ACCATCTCCA GCCCGCAGCT GATCATCCGC AAGGACGAAA AGCGCGTCTT CAAGACGCTG
GCTGACCTCA AGGGCAAAAA GCTCGGCCTG GGCCAGGGCA CCAACTTTGC CGACATGGCC
AAGAAGGTTG GCGACATCGA CATCAAAACC TATCCCGGCG CGCAGGAATA CCTGCAGGAC
CTGGCTTTGG GCCGCATTGA CGCGGCGCTG AACGACAGCC TGCTGATTCC CTATATCGTC
AAGCAGACCA AGCTGCCTCT CAAGCCCGGC GCGCCCGTGG GTGAACTGGA GAAATCAGGC
ATTCCTTTCG TCAAGAACAA TCCCAAGTTC AAGGCCGCCA TCGACAAGGC GCTGGCTGAT
CTGCAGGCAG ACGGCAGCTT CGCCAAAATT TCGAACAAAT GGTTTGACCG CGACGTGAGC
AAGCCACCCG TCGCCAAGTG A
|
|---|
| Protein sequence | MKNMNIRKAL ASTILVALAL GAGIAHAADL LDTVKQRGTL KVALEGTYPP FNYKENDKLA
GFEVELANAL AQKLGVKAEF TTSEWSAILA GLQAGKYDVV INQVGITDKR KETFDFSEPY
TISSPQLIIR KDEKRVFKTL ADLKGKKLGL GQGTNFADMA KKVGDIDIKT YPGAQEYLQD
LALGRIDAAL NDSLLIPYIV KQTKLPLKPG APVGELEKSG IPFVKNNPKF KAAIDKALAD
LQADGSFAKI SNKWFDRDVS KPPVAK
|
|---|
| |